Rubripirellula lacrimiformis: K227x_38360
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Entry
K227x_38360 CDS
T07352
Symbol
cefD
Name
(GenBank) Isopenicillin N epimerase
KO
K04127
isopenicillin-N epimerase [EC:
5.1.1.17
]
Organism
rlc
Rubripirellula lacrimiformis
Pathway
rlc01100
Metabolic pathways
rlc01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rlc00001
]
09100 Metabolism
09110 Biosynthesis of other secondary metabolites
00311 Penicillin and cephalosporin biosynthesis
K227x_38360 (cefD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01008 Polyketide biosynthesis proteins [BR:
rlc01008
]
K227x_38360 (cefD)
Enzymes [BR:
rlc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.17 isopenicillin-N epimerase
K227x_38360 (cefD)
Polyketide biosynthesis proteins [BR:
rlc01008
]
Nonribosomal peptide tailoring proteins
Others
K227x_38360 (cefD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Aminotran_1_2
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
QDT05436
UniProt:
A0A517NE85
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All DBs
Position
complement(5016244..5017464)
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AA seq
406 aa
AA seq
DB search
MATQSDSTHPDSPNVSSSPSLRELWSLNPDVDFLNHGSFGATPICVQEQQRDWIQQLECD
PIEFLGPERSLIPRLDHVRAVVADQVATESSNIAFVRSATDGVNAVLRSMSFRAGDQILI
TSHGYNACNNAARFVADRSSAEVVIAELPFPIHAATEVIDAFESSITSRTKLVLVDHVTS
STALVLPIAEIVDLAHRRGAKVLVDGAHAPGLLPVDLAAISADFYTANHHKWWCAPKASG
FLMVCPESQSDIHPTVISHGANTRGLGDSRFQSEFNWQGTYDPSSLLSLPGALQFLNQLH
PNGMPAVMENNRALALAGRRLILETLGSAEPAPESMIGSMATIPVHALDAMNDNQLDAFR
RDLFHVHRIEMPVIRIADGPTCVRISAHAYNDLDQYRRLADVLKAV
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
ttggcaacgcaatctgattcgacccatccggactcaccgaacgtatccagcagtccatca
ctgcgcgaactttggtcactgaacccggacgtcgattttttgaatcacgggtctttcggt
gccacaccgatctgcgttcaggaacaacaacgcgattggattcagcagctggaatgcgat
ccgatcgagtttttgggacccgagcgcagtttgattcctcgcttggaccatgttcgggca
gtcgtggcggatcaggttgccaccgaatcgtccaacatcgcttttgtgcgcagcgcgacc
gacggtgtgaatgcggtgcttcgatcgatgtcattccgcgctggtgaccaaattctgatc
accagtcacggctacaacgcctgcaacaatgccgctcgattcgtggccgatcgatcgtcg
gcagaggtggtgattgccgaactgccgtttccgattcatgcggcgacggaggtgatcgat
gcgttcgaatcatccatcacatcacggacgaaattggtgttggtcgatcacgtgaccagt
tcgaccgccttggtgctgccgatcgccgagatcgtcgacctcgcccaccgtcgcggtgcg
aaggtgttggtggatggtgcccacgcgccgggattgctgcccgtggaccttgccgcgatc
tcggcagatttctataccgccaaccaccacaaatggtggtgtgcgcccaaagcgtcaggt
ttcctgatggtttgccccgaaagtcaatcagacatccatcccacggtgatcagccatggt
gcgaacacgcggggattgggcgattcgcggttccagtcggaattcaactggcaaggcacc
tacgacccatcgtcgctgctatcgctacccggtgcattgcagttcttgaatcagctgcat
ccaaacggaatgcccgcggtgatggaaaacaaccgtgccctcgccctggccggtcgtcga
ttgattctggaaacgttgggcagcgcggaaccagcgccggaatcgatgatcggcagcatg
gccaccattccggtccacgccctggacgccatgaacgacaatcaactggacgcatttcga
cgcgatctatttcacgtccatcggatcgagatgccggtcattcgaatcgccgacgggcca
acctgcgtgcggatctcggcacatgcttacaacgatctggaccagtaccgccgcctagcc
gatgtgctgaaggcggtttag
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