Rhizobium johnstonii: RL3297
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Entry
RL3297 CDS
T00402
Symbol
lpxC
Name
(GenBank) putative UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
rle
Rhizobium johnstonii
Pathway
rle00540
Lipopolysaccharide biosynthesis
rle01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
RL3297 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rle01005
]
RL3297 (lpxC)
Enzymes [BR:
rle01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
RL3297 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
rle01005
]
Lipid A
RL3297 (lpxC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
RebB
Motif
Other DBs
NCBI-ProteinID:
CAK08784
UniProt:
Q1ME43
LinkDB
All DBs
Position
complement(3455095..3456051)
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AA seq
318 aa
AA seq
DB search
MAIGLLGFQTTVSRPVTLSGIGVHSGADVSITLNPAESGTGVVFQRLHDNGDITELKAVS
SQVGNTDLCTVLGFSPAHSVATIEHVMAAVYALGLDNVVIEVQGSEMPIMDGSSLPFVEA
IEQVGLVSLGVKRRYIRITKPVRIEHGGSWSEFRPYDGTRFEVEIDFDCPLIGRQKWAGD
MTAAVFKAELSRARTFGFMRDVERLWASGHALGSSLENSVVISDDNTVINVEGLRYAKDE
FVRHKTLDAVGDLSLAGAQFIGCYRSYRGGHKMNANALKALLADSSAYEVVETSTPRQRV
AARELIAVSASEFAPWSA
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggcaattggcttgctgggttttcaaacgacggtatcgcgtcccgtgacgctttcgggc
atcggggtccattcgggcgctgacgtttcgatcaccctgaacccggccgaatcgggcacc
ggcgtcgttttccagcgcctgcatgacaatggcgacatcaccgaactcaaggccgtttcc
tcgcaggtcggcaataccgacctctgcaccgtactcggcttctcgcccgcccattcggtc
gcgacaatcgagcatgtcatggccgccgtctatgcgctcggcctcgacaatgtggtgatc
gaggtgcagggttccgaaatgccgatcatggacggcagctcgctgcccttcgttgaggcg
atcgagcaggtcggtctcgtctcgctcggcgtcaagcgccgctatatccgtatcaccaag
ccggtgcgaatcgagcatggcggctcctggagcgaattccgcccctatgacggcacgcgc
ttcgaagtcgagatcgatttcgattgcccgctgattggccggcagaagtgggctggcgat
atgaccgccgccgtcttcaaggccgagctttcccgcgcccgcaccttcggcttcatgcgc
gatgtcgaacgtctctgggcgtcgggccacgcgctcggctcttcactcgaaaattccgtc
gtcatttcggacgacaacaccgtcatcaacgtcgaaggactgcgttacgccaaggacgaa
ttcgtccgccacaagacgctcgatgccgtcggcgatctgtcgcttgccggcgcccagttc
atcggctgctaccgttcctatcgcggcggtcacaagatgaacgccaatgcgctgaaggcg
ctgctcgccgattcctccgcctacgaggtggtcgagacgtcgacgccgcgccagcgcgtc
gctgcccgcgaactgatcgcggtcagtgcttcggaattcgctccctggtcggcatga
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