Rhizobium johnstonii: RL3362
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Entry
RL3362 CDS
T00402
Symbol
metH
Name
(GenBank) putative methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
rle
Rhizobium johnstonii
Pathway
rle00270
Cysteine and methionine metabolism
rle00450
Selenocompound metabolism
rle00670
One carbon pool by folate
rle01100
Metabolic pathways
rle01110
Biosynthesis of secondary metabolites
rle01230
Biosynthesis of amino acids
rle04980
Cobalamin transport and metabolism
rle04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
RL3362 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
RL3362 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RL3362 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
RL3362 (metH)
04980 Cobalamin transport and metabolism
RL3362 (metH)
Enzymes [BR:
rle01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
RL3362 (metH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
CAK08849
UniProt:
Q1MDX8
LinkDB
All DBs
Position
complement(3529747..3533457)
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AA seq
1236 aa
AA seq
DB search
MRQAASERILVLDGAMGTQIQGLGYDEDQFRGTRFIGCACHQKGNNDLLILTQPDAIEEI
HYRYAKAGADILETNTFSSTRIAQADYEMEGAVYDLNKEGAEIVRRAAQRAEREDGRRRF
VAGAIGPTNRTASISPDVNNPGFRAVTFDDLRTAYGEQIDGLIDGGADIILIETIFDTLN
AKAAIFACEERFEAKGVRLPVMISGTITDLSGRTLSGQTPSAFWNSVRHANPFTIGLNCA
LGANAMRPHLQELSGVADTFICAYPNAGLPNEFGQYDETPELMAAQIDGFAREGLVNIVG
GCCGSTPEHIKAIAETVAKYKPRPIPEHRPFMSLSGLEPFELTKDIPFVNVGERTNVTGS
ARFRKLITNADFTAALDVARDQVENGAQVIDINMDEGLIDSEKAMVEFLNLIAAEPDIAR
VPVMIDSSKFSIIESGLKRVQGKPIVNSISLKEGEENFLAQARLLHNYGAAVVVMAFDET
GQADSYERKVEICTRAYKLLTEKIGYPPEDIIFDPNIFAVATGIEEHNNYGVDFIEATRT
IRERMPLVHISGGVSNLSFSFRGNEPVREAMHAVFLYHAIQAGMDMGIVNAGQLAVYDNI
DPELREACEDVVLNRRPDGTERLLEVAEKFRGGAAREGRVQDLSWREWSVEKRLEHALVN
GITEYIEADTEEARLQAVRPLHVIEGPLMAGMNVVGDLFGSGKMFLPQVVKSARVMKQAV
AVLLPYMEEEKRLNGGDERRSAGKILMATVKGDVHDIGKNIVGVVLACNNYEIVDLGVMV
PATKILETAIAEKVDVIGLSGLITPSLDEMVHVAAEMERQGFEIPLLIGGATTSRVHTAV
KIHPGYNKGQTIYVTDASRAVGVVSALLSPETRHSYVDDIRAEYAKVAAAHARSEAEKVR
LPLPRARENAHKVDWSAYRPVKPQFFGTRVFEDYDLAELAKYVDWTPFFQTWELRGRYPA
ILEDEKQGEAARALWADAQAMLKKIIDEKWFRPRAVIGFWPAGAVGDDIRLFTDESRKHE
LETFYTLRQQLSKRDGRPNVALSDFVAPVSSGVEDYVGGFVVTAGIEEIAIAERFERAND
DYSSILVKALADRFAEAFAERMHEQVRREYWGYAKDETLSKEDLITEAYAGIRPAPGYPA
QPDHTEKATLFKLLDAEKAAGVKLTESYAMWPGSSVSGLYIGHPDSYYFGVAKVERDQVE
DYAKRKGMGITEVERWLGPVLNYVPRKAETEIEDAA
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
ttgagacaagccgcgagcgaacgcatccttgttctggacggcgccatgggcacgcagatc
caggggctcggctatgatgaggaccagtttcgcgggacgcgcttcatcggctgcgcctgt
caccagaagggcaataacgaccttctgatcctgacccagccggacgcgatcgaagagatc
cattacagatacgccaaggctggcgccgatattctcgagaccaacaccttctcctcgacc
cgcatcgcgcaggccgattacgagatggaaggtgcggtctacgacctcaacaaggaaggt
gccgagatcgtgcgccgggcggcacagcgcgccgagcgcgaggacggccgccgccgcttc
gtcgccggcgccatcgggccgaccaaccgcacggcttcgatctcgcccgacgtcaacaat
cctggctttcgtgccgtgaccttcgacgatctgcgcaccgcctatggcgagcagatcgac
gggctgatcgacggcggcgccgacatcatcctcatcgagacgatcttcgacacgctgaat
gccaaggctgcgatcttcgcctgcgaggagcgcttcgaggccaagggtgtgcgcctgcct
gtgatgatctcgggcacgatcaccgatctgtccggccgcacgttgtccggccagacgccg
tcggccttctggaattcggtgcgccatgccaatcccttcacgatcgggctcaactgcgcg
ctcggcgccaatgcgatgcgcccgcatctgcaggagctttcgggtgttgccgataccttc
atctgcgcctatccgaatgccggcctgccgaacgaattcggccagtatgacgaaaccccg
gagctgatggcggcgcagatcgacggcttcgctcgcgagggcctcgtcaacatcgtcggc
ggctgctgcggctcgacgccggagcatatcaaggcgatcgccgagacggttgcgaaatac
aagccacggccgatccccgagcatcgccccttcatgtcgctgtcgggtctcgaacctttc
gaactgaccaaggacattcccttcgtcaatgtcggcgagcgcaccaacgtcaccggctcg
gcccgcttccgcaagctgatcaccaatgccgatttcaccgcagcgctcgatgtcgcccgc
gaccaggtcgagaacggcgcgcaggtgatcgacatcaacatggacgaaggcctgatcgat
tcggaaaaggcgatggtcgagttcctcaacctgatcgccgccgagcctgacatcgcccgt
gtgcctgtcatgatcgactcgtcgaagttctcgatcatcgaatccggcctgaagcgcgtc
cagggcaagccgatcgttaactcgatctcgctgaaggaaggcgaagagaatttcctcgcc
caggcgcggctgctgcacaattacggtgcggccgtcgtcgtcatggccttcgacgagacg
gggcaggcggacagctatgagcgcaaggtggaaatctgcacgcgcgcctacaagctgctg
accgagaagatcggctacccgcccgaggacatcattttcgacccgaacatcttcgcggtc
gcgaccggcatcgaagagcacaataattacggcgtcgatttcatcgaggcgacgcggacg
atccgcgagcgcatgccgctggtgcatatttcgggcggcgtctccaacctgtccttctcg
ttccgcggcaacgagccggtgcgcgaggcaatgcatgccgtgttcctctaccacgccatc
caggcgggcatggacatgggcatcgtcaatgccggccagcttgccgtctacgacaatatc
gatcccgagctgcgcgaggcctgcgaggacgtggtgctgaaccgtcgccctgatggtacc
gagcggctgctcgaagtggcggagaaattccgtggcggcgccgcacgcgaaggccgcgtc
caggatctttcctggcgcgaatggagcgtcgagaagcgtctagagcatgcgctggtcaat
ggcatcaccgaatatatcgaggccgataccgaggaggcgcgcctgcaggcagtccggccg
ctgcacgtcatcgaagggccgctgatggccggcatgaacgtcgtcggcgatctgttcggc
tcgggcaagatgttcctgccgcaggtggtcaagtcggcgcgcgtgatgaagcaggcggtg
gccgtgctgctgccctacatggaagaggaaaagcgcctcaacggcggcgatgagcgtcgg
tcggccggcaagatcctgatggcgacggtcaagggcgacgtgcacgatatcggcaagaac
atcgtcggcgtcgtgcttgcctgcaacaattacgagatcgtcgacctcggcgtcatggtg
ccggcgacgaagatcctcgaaacggcgattgccgaaaaggtcgatgtcattggcctttcc
ggcctgatcacgccgtcgctcgacgagatggtccatgtcgcggccgaaatggagcggcag
ggcttcgagatcccgctgctgatcggcggggcaacgaccagccgcgtgcatacggccgtg
aagatccatcccggctacaacaaggggcagacgatctacgtcaccgatgcgagccgcgcc
gtcggcgtcgtctcggctctgctgtcgccggaaacgcggcacagctatgtcgacgatatc
cgcgccgaatatgccaaggtggcggccgcccatgcgcgcagcgaggccgagaaggtgcgc
ttgccgttaccccgggctcgcgagaatgcgcataaggtcgattggtctgcctaccggccg
gtgaagccgcaattcttcggcacacgggtgttcgaggattacgatctggccgagcttgcc
aaatatgtcgactggacgccgttcttccagacctgggagctgcgcggccggtacccggcc
attctcgaagacgagaagcagggcgaggcggcgcgtgcgctctgggccgatgcgcaggcg
atgctgaagaagatcatcgacgagaagtggttccgcccgcgcgccgtcatcggcttctgg
ccggccggtgccgtcggcgacgatatccggctgttcacggacgagagccggaagcacgag
cttgagaccttctatacgctgcgccagcagctttcgaagcgggacgggcggccgaacgtg
gcgctctccgacttcgtggcgccggtttcgagcggtgtcgaggactatgtcggcggcttc
gtggtgacggcgggtatcgaggaaatcgccatcgccgaacgtttcgaacgggcgaacgac
gattattcttcgatcctcgtcaaggcgctggccgaccgcttcgccgaagcttttgccgag
cgcatgcacgagcaggtgcgacgcgaatactggggctatgccaaggacgagacgctcagc
aaggaggatctcatcaccgaagcctatgccggcatccgcccggcgcccggttatcccgcc
cagcccgaccacaccgaaaaggcaacactcttcaagctgctagatgctgaaaaagcggcc
ggcgtgaagctgacggagagctatgcgatgtggcccggttcgtcggtttccggcctctat
atcggccatcccgactcctattatttcggtgtcgccaaggtggagcgcgatcaggtggaa
gactatgccaagcgcaagggcatgggcattaccgaagtcgagcgctggctcggaccggtg
cttaactatgtgccgcgcaaggccgaaaccgagatcgaggatgcggcgtaa
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