Rhizobium johnstonii: RL4256
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Entry
RL4256 CDS
T00402
Symbol
exsD
Name
(GenBank) conserved hypothetical protein
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
rle
Rhizobium johnstonii
Pathway
rle00790
Folate biosynthesis
rle01100
Metabolic pathways
Module
rle_M00988
PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
RL4256 (exsD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rle03016
]
RL4256 (exsD)
Enzymes [BR:
rle01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
RL4256 (exsD)
Transfer RNA biogenesis [BR:
rle03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
RL4256 (exsD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
CAK09745
UniProt:
Q1MBD8
LinkDB
All DBs
Position
4512362..4513105
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AA seq
247 aa
AA seq
DB search
MSVGTIRVSEIFGPTIQGEGALIGLPTVFVRTGGCDYRCSWCDSLHAVESAFRDQWIPMS
TEAVWHKVTELSGGKPLTVSLSGGNPAIQPLRPLIELGHSQGYRFALETQGSVAQAWFRD
LDTLVISPKPPSSGMLTDWDQVDNCLQLAAGGPEVALKIVVFDDADYEFAQRAGQRYPQI
PLFLQPGNHTPPPPDDPDDDDDNARIDIDGVMDRMHWLVERVTADQWFEVRVLPQLHVLL
WGNKRGV
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgtcggaaccattcgcgtcagcgagatctttggcccgaccatacagggtgaaggc
gccttgatcgggctgccgacggtgttcgtgaggacaggcggctgtgactatcggtgttcc
tggtgcgacagccttcacgcggtcgaaagcgcgttccgggatcaatggattcccatgtcc
actgaggcggtctggcataaggtcacggaactctcagggggaaagccactgacggtttcc
ctttccggaggcaatccggcgatacagcccctaaggccgcttatcgagcttggccattcg
caaggatatcgctttgccctggaaacacagggaagcgtggcccaggcctggtttcgcgat
ctcgacaccctggttatcagccccaaaccgccatcaagcggaatgctgacggattgggat
caggtggacaactgccttcaactggccgccggcggaccggaggtcgcattgaagattgtt
gtcttcgacgatgccgactacgaattcgcccagcgcgcgggtcagcgctatccccaaatt
cccttgttccttcagcccggcaaccatacgccgccaccgcccgatgaccccgatgatgat
gacgataacgcacgcattgatatcgacggcgtgatggatcggatgcactggcttgtcgaa
agggtgacggccgaccaatggtttgaagtccgcgtactgccgcaattgcacgtgctgctc
tggggaaacaagcgaggcgtatga
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