Rhizobium johnstonii: RL4439
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Entry
RL4439 CDS
T00402
Symbol
mdh
Name
(GenBank) putative malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
rle
Rhizobium johnstonii
Pathway
rle00020
Citrate cycle (TCA cycle)
rle00270
Cysteine and methionine metabolism
rle00620
Pyruvate metabolism
rle00630
Glyoxylate and dicarboxylate metabolism
rle00680
Methane metabolism
rle00710
Carbon fixation by Calvin cycle
rle00720
Other carbon fixation pathways
rle01100
Metabolic pathways
rle01110
Biosynthesis of secondary metabolites
rle01120
Microbial metabolism in diverse environments
rle01200
Carbon metabolism
Module
rle_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rle_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rle_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RL4439 (mdh)
00620 Pyruvate metabolism
RL4439 (mdh)
00630 Glyoxylate and dicarboxylate metabolism
RL4439 (mdh)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
RL4439 (mdh)
00720 Other carbon fixation pathways
RL4439 (mdh)
00680 Methane metabolism
RL4439 (mdh)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
RL4439 (mdh)
Enzymes [BR:
rle01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
RL4439 (mdh)
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GFIT
Motif
Pfam:
Ldh_1_N
Ldh_1_C
Glyco_hydro_4
DUF357
Motif
Other DBs
NCBI-ProteinID:
CAK09925
UniProt:
O33525
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All DBs
Position
complement(4721163..4722125)
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AA seq
320 aa
AA seq
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MARNKIALIGSGMIGGTLAHLAGLKELGDIVLFDIADGIPQGKGLDISQSSPVEGFDVNL
TGASDYSAIEGADVCIVTAGVARKPGMSRDDLLGINLKVMEQVGAGIKKYAPNAFVICIT
NPLDAMVWALQKFSGLPANKVVGMAGVLDSSRFRLFLAKEFNVSVQDVTAFVLGGHGDTM
VPLARYSTVGGIPLTDLVTMGWVTKERLEEIIQRTRDGGAEIVGLLKTGSAYYAPAASAI
EMAESYLKDKKRVLPCAAHLSGQYGVKDMYVGVPTVIGAGGVERIIEIDLNKTEKEAFDK
SVGAVAGLCEACINIAPALK
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtaacaagatcgcactcattggttctggcatgattggtggcacgctggcgcac
ctcgccggcctgaaggaactgggcgacatcgttctcttcgacatcgcggacggcattccc
cagggcaagggtctcgatatttcccagtcgtcgccggtcgaaggcttcgacgtcaatctg
acgggcgccagcgactattccgcgatcgaaggcgctgacgtctgcatcgtcacggcgggc
gtcgcccgcaagcccggcatgagccgcgatgaccttctcggcatcaacctcaaggtcatg
gagcaggtcggcgccggcatcaagaagtatgcgccgaacgctttcgtgatctgcatcacc
aatccgctcgacgccatggtctgggcgctgcagaagttttccggtcttccggccaacaag
gtcgtcggcatggccggcgttctcgactcctcgcgcttccgtcttttcctcgccaaggaa
ttcaacgtgtccgtacaggacgtcacggccttcgttctcggcggccacggcgacacgatg
gtgccgctcgcccgctactcgacggtcggcggcattccgctcaccgatctcgtcaccatg
ggctgggtcaccaaggagcgcctcgaagagatcatccagcgcacccgtgacggcggcgcc
gaaatcgtcggcctgctgaagaccggctcggcctattacgccccggccgcctcggcgatc
gagatggccgaatcctacctcaaggacaagaagcgcgttctgccctgcgcggcccacctc
tccggtcagtacggcgtcaaggacatgtatgtcggcgttcccaccgtcatcggcgccggc
ggcgtcgagcgcatcatcgagatcgatctcaacaagaccgagaaggaagccttcgacaag
tccgtcggcgccgttgccggtctctgcgaagcctgcatcaacatcgcgcctgccctcaag
tag
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