Rhizobium johnstonii: RL4720
Help
Entry
RL4720 CDS
T00402
Symbol
gdhB
Name
(GenBank) putative arginine inducible NAD-dependent glutamate dehydrogenase
KO
K15371
glutamate dehydrogenase [EC:
1.4.1.2
]
Organism
rle
Rhizobium johnstonii
Pathway
rle00220
Arginine biosynthesis
rle00250
Alanine, aspartate and glutamate metabolism
rle00430
Taurine and hypotaurine metabolism
rle00910
Nitrogen metabolism
rle01100
Metabolic pathways
rle01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
RL4720 (gdhB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
RL4720 (gdhB)
00220 Arginine biosynthesis
RL4720 (gdhB)
09106 Metabolism of other amino acids
00430 Taurine and hypotaurine metabolism
RL4720 (gdhB)
Enzymes [BR:
rle01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.2 glutamate dehydrogenase (NAD+)
RL4720 (gdhB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_GDH_CD
GDH_C
GDH_HM3
GDH_ACT2
GDH_HM1
GDH_ACT3
GDH_ACT1
ELFV_dehydrog
Motif
Other DBs
NCBI-ProteinID:
CAK10203
UniProt:
Q1MA37
LinkDB
All DBs
Position
5024336..5029114
Genome browser
AA seq
1592 aa
AA seq
DB search
MAARNNPKREKQIESARKIAKATGEAHLDPEILFGRASNDDLELYTPEMLALSAVHSAKE
LAAWNGKAPRVGIDTITDVTPDGIAVSVLSVTDQNMPFLFESVMGEVTSTYRDLFMAVHP
ILVMEKGKAPALYSADHPSDPANRVSHIQLHIAPLNSTQAADLVKRIEKVLEQVRLSVSD
WKPMLSKIDGVIAELAANGASRKKADRDEAVAFLTWLRDENFTFLGMREYVYSGKGAEAK
VERDKGAGLGILSNPDVLVLRTGKDAVTTTPEILAFLDGPDFLIVTKANVKSIVHRRAYM
DYVGVKRFDADGNVTGELRIVGLFTSTAYTSLASEIPLLRSKIEKVKEHFGFDPMSHSGR
MLDNTLESYPRDDLFQIDTTLLASFAEQINDLGDRPRVRVLPRIDHFDRFVSVIVYVPRE
EYDSIVRERIGTYLKTVYDGRVSAYYPAFPEGGVARVHFIIGRSGGKTPRIPQAKLEQVI
REITARWDDRFEALAGVKAPKISVDQAFQDSFTPEETVADLADIGACATGEPLRIHFYHR
QEEEQGRILSLKIFHAGGQLALSRRVPLLENLGFNVVSERTFDIGVPVADGEKKLVVLHD
MELEARNGGEIDLQRYGAALEEGFVAAFAGTIDNDSFNRLILSAGLSARETNVLRAYARY
LRQAGIPYSQDYIATTLDKYPGVAAAIFRLFHDTLDTRLTEKARVKKLAELHQAIETELA
NVPSLDDDRILRRYVNIVDATLRTNYFQKNPDGSPKPMLAFKLDPHLVDGLPEPKPFREM
FVYGVEVEGVHLRFGKVARGGLRWSDRAEDYRTEVLGLVKAQQVKNAVIVPVGAKGGFYP
KKLPVSGSRDETFNAGREAYKTYIRTLLSITDNISGADIVPPKDTVRLDGDDPYFVVAAD
KGTATFSDTANALAQEAGFWLDDAFASGGSAGYDHKKMGITARGAWETVKRHFREMDIDI
QTTPFTVAGVGDMSGDVFGNGMLLSPKIRLIAAFDHRDIVIDPDPDMEKTLTERQRLFDL
PRSSWQDFDKSVLSKGAMIISRSAKSVTLTPEAVAAIGIDKAVATPFEIMTAILKSPVDL
LWFGGIGTYVKASSETDTEVGDRANDPIRITAAEVRAKVIGEGANLGVTQKGRIAYGLKG
GRCNSDAIDNSAGVNTSDVEVNIKIALAAAMHDGRLTRVKRDQLLSSMTSEVATLVLRNN
YLQSLAISLTERKGTANGLELGRFMSVLEGAGQLNRKVETLPDDQTLAERYAAGKPLTRP
EIGVLVSYAKIVLFDALAASDLPDDPYFIATLLNYFPVKMQKSNAGDIASHRLKREIVAT
VLANEAINRGGPSFTVAMMDATAASAPEVVRAAIVARDGFDLTRLWAETDALDGKISGDL
QNRIYEEISHSFIVLTRLLLKTGMTKADMVEVISRLQAALKKLKTAFAGQVAGEVAVRQA
EYSQAGLPEKLAADIASLPIFALVPEIMQIAERTGEPLVRAAENYIAVSQTFRIGRLLAA
GGRILTSDHYENLALARSIDQIASARRDIVISALSDHGKEKLPVQAWHAQDRIRINRILE
ELSSLSDGGDPNLARITVAAGILTDLARDRAR
NT seq
4779 nt
NT seq
+upstream
nt +downstream
nt
atggctgccagaaacaatccgaaacgggaaaagcagatcgaaagcgcgcgcaagatcgcc
aaggcgacgggcgaggcgcatctcgatccggaaattctcttcggccgggcaagcaatgac
gatctcgaactctatacgccggaaatgctggcgctctccgcggtgcattcggcaaaggaa
ctcgccgcctggaacggcaaggcgccccgcgtcggcatcgacacgattaccgatgtgacg
cctgatggcatcgccgtctcggtgctttcagtcaccgaccagaacatgccttttctgttt
gaatcggtcatgggcgaagtgacgagcacctatcgcgacctgttcatggccgtgcatccc
atcctggtcatggaaaagggcaaggcgccagcgctttattccgccgatcacccgagcgat
ccggccaaccgcgtcagccatatccagcttcatattgcgccgctcaattccacccaggcc
gccgatctcgtcaaacgcatcgaaaaagtgctcgaacaggtccgcctctcggtgtccgac
tggaagccgatgctttccaagatcgacggcgtgatcgcagagcttgcggccaatggcgcc
agccggaagaaggccgatcgcgacgaagccgtcgctttcctgacctggctgcgcgatgag
aatttcactttcctcggcatgcgggaatatgtctattccggcaaaggggccgaagccaaa
gtcgaacgcgacaagggtgctggcctcggcattctttccaatcccgatgttctcgtgctg
cgcaccggcaaggatgcggtgacgacgacacctgagatccttgccttcctcgacggcccc
gacttcctgatcgtcaccaaggcgaatgtgaaatcgatcgtccatcgccgggcctatatg
gattatgtcggcgtcaagcgcttcgacgccgacggcaacgtcaccggcgaactgcgcatc
gtcggtcttttcacctcgacggcctatacctcgctcgcctcggaaatcccgctgctgcgt
tccaagatcgagaaggtgaaggagcatttcggcttcgacccgatgagccattccggccgc
atgctcgacaatacgctggaatcctatccgcgcgacgaccttttccagatcgacacgacg
ctgcttgcaagttttgcggaacagatcaacgacttgggcgatcggccgcgcgtgcgcgtc
ctgccgcgcatcgaccatttcgaccgcttcgtctcggtgatcgtctacgtgccgcgcgag
gaatacgactcgatcgtccgagagcggatcggcacctatctgaagaccgtctatgacggc
cgagtctccgcctattacccggcttttccggaaggcggcgtggcgcgcgtgcatttcatc
atcggccgctccggcggcaagacgccacgcattccacaagcaaagctcgagcaggtgatc
cgcgagatcaccgcccgttgggacgaccgtttcgaggcactggcgggcgtcaaggcgccg
aagatatccgtcgaccaagccttccaggattccttcacgcccgaggaaaccgtggccgac
ctcgccgatatcggtgcctgcgccaccggcgaaccgctacgcatacacttttaccaccgt
caggaagaagaacagggccgcatcctttccttgaagatcttccacgccggcggccagttg
gcgctgtcgcgccgcgtgccgcttctcgagaatctcggcttcaacgtcgtcagtgaacgc
accttcgatatcggtgtgccggtcgccgatggagaaaagaaactcgtcgtgctgcacgat
atggagctcgaggcccgcaatggcggcgagatcgatctgcagcgttacggcgccgccctc
gaggaaggcttcgtcgccgctttcgccggcacgatcgacaatgacagcttcaaccggctg
atcctttcggccgggctctcggcgcgcgagacgaacgtgttgcgcgcctatgcgcgttat
ctccgccaggccggcatcccctattcgcaggattatattgcgacgacgctcgacaaatat
cccggtgttgccgccgccatcttccgtctcttccatgacacgctcgacaccaggcttacc
gagaaagctcgcgtcaagaagcttgccgaactgcaccaggcgatcgagactgaacttgcc
aacgtgccgagcctcgacgacgaccgtatcctgcgccgctatgtcaatatcgtcgatgcg
accctgcgcaccaattatttccagaagaacccggacggctcgccgaagccgatgctggcc
ttcaagcttgatccgcacttggtcgacggtctgccggagccgaagcccttccgcgagatg
ttcgtctacggcgtcgaagtcgagggcgtgcacctgcgcttcggcaaggtggcgcgcggc
ggcctgcgctggtcggaccgcgccgaggattaccgcaccgaagtgctcggcctcgtcaag
gcccagcaggtgaagaacgcggtcatcgtgccggtcggcgccaaaggcggcttttatccg
aagaagcttcctgtcagcggcagccgcgacgagaccttcaatgccggtcgcgaggcttac
aaaacctatatccgaacgctgctttcgatcaccgacaatatatcgggcgccgacatcgtc
ccgccgaaggacacggtcaggctcgatggcgacgatccctatttcgtcgtcgccgccgac
aagggcacggcgaccttttccgataccgccaatgcgctggcgcaggaagccggcttctgg
ctggacgacgccttcgcgtccggcggctcggccggctacgaccataagaagatgggcatc
accgcccgcggcgcctgggaaacagtaaaacgccatttccgtgagatggacatcgatatc
cagacgacgcccttcaccgtcgccggcgtcggcgatatgtcgggcgatgtcttcggcaac
ggcatgctgctttctcccaagatccggctcattgccgccttcgatcaccgcgacatcgtc
atcgatcccgatcccgatatggaaaagacgctgaccgaacgccagcgactcttcgacctg
ccgcgttcgagctggcaggacttcgacaaaagcgtgctgtcgaagggcgcgatgatcatt
tcccgctcggcgaaatcggtgacgctgacgccggaagcggttgccgcgatcggcatcgac
aaggccgtggcgacgcccttcgagatcatgacggcgatcctgaagagcccggtcgacctg
ctctggttcggcggcatcggcacctatgtgaaagcctcgtccgaaacagacaccgaagtc
ggcgaccgcgccaacgacccgatccgcatcacggcggcggaggtgcgcgccaaggtgatc
ggcgagggcgcaaacctcggcgtcacccagaagggccgcatcgcctacggtctgaagggt
gggcgctgcaactccgacgccatcgacaactcggccggcgtcaatacctcggacgtcgag
gtgaatatcaagatcgcgctggcagccgccatgcatgacgggcgcctgacgcgcgtaaaa
cgcgatcagcttctttcttcgatgaccagcgaagtggcgaccctggttctgcgcaacaac
tacctgcagtcgctggcaatctcactgacggaacgcaaggggacggcaaatggcctggag
cttggccgcttcatgagcgtgctcgagggcgccggccagctgaaccgcaaggtcgaaacg
ctgccggacgaccagaccctggccgaacgctatgcggccggcaagccgttgacgcggccg
gaaatcggcgtgctggtgtcttatgccaaaatcgtgctcttcgatgcgctggccgcaagc
gacctgcctgatgatccctatttcatcgcaacgcttttgaattacttccccgtgaagatg
cagaagtcgaacgccggcgatatcgccagccaccgcctgaagcgcgaaatcgttgcgacc
gtgcttgccaacgaagcgatcaatcgtggcgggccgagcttcaccgtcgccatgatggac
gcgacggcggcgtcggcaccggaagtggtgcgcgccgcaatcgtcgcgagagacggtttc
gacctgacccgcctgtgggccgagacggacgccctggacggcaagatatcaggcgatctg
cagaaccgcatctacgaggagatcagccacagctttatcgtgctgacgcgcctgctgctg
aaaacaggcatgaccaaggccgatatggtggaagtgattagccggcttcaggcggctctg
aagaagctgaaaaccgccttcgccggacaggtggccggcgaggtcgccgtgcgccaggcg
gagtacagccaggcgggcctgcccgaaaaactcgccgccgacatcgccagcctcccgatc
ttcgcactggtgccggagatcatgcagatcgccgagcgcaccggcgaacccctggtacgc
gccgccgagaactacatcgccgtgtcgcagaccttccgtatcggcaggctgctggcggcg
ggagggcggatccttacctcagaccattacgagaatctggcgcttgcccgcagcatcgac
cagattgccagcgcaaggcgcgacatcgtcatctcggccctttccgatcacggcaaggaa
aagctgcccgttcaagcctggcatgcacaggatcgtatccgcatcaaccgtatcctcgag
gagctttcaagcctcagcgatggtggcgatcccaatctcgcgcgtattaccgttgctgca
ggtatcctgaccgatcttgcgcgcgaccgggcgaggtga
DBGET
integrated database retrieval system
