Rhizobium johnstonii: pRL90210
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Entry
pRL90210 CDS
T00402
Name
(GenBank) Putative short-chain dehydrogenase
KO
K00059
3-oxoacyl-[acyl-carrier protein] reductase [EC:
1.1.1.100
]
Organism
rle
Rhizobium johnstonii
Pathway
rle00061
Fatty acid biosynthesis
rle00780
Biotin metabolism
rle01100
Metabolic pathways
rle01110
Biosynthesis of secondary metabolites
rle01212
Fatty acid metabolism
rle01240
Biosynthesis of cofactors
Module
rle_M00083
Fatty acid biosynthesis, elongation
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
pRL90210
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
pRL90210
09110 Biosynthesis of other secondary metabolites
00333 Prodigiosin biosynthesis
pRL90210
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rle01004
]
pRL90210
Enzymes [BR:
rle01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.100 3-oxoacyl-[acyl-carrier-protein] reductase
pRL90210
Lipid biosynthesis proteins [BR:
rle01004
]
Fatty acid synthase
Component type
pRL90210
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
adh_short_C2
adh_short
KR
SDR
3HCDH_N
Epimerase
RmlD_sub_bind
NmrA
Motif
Other DBs
NCBI-ProteinID:
CAK03928
UniProt:
Q1M945
LinkDB
All DBs
Position
pRL9:complement(229682..230467)
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AA seq
261 aa
AA seq
DB search
MDFGLKDKTALVLGAGGGLGSAIAAKLAREGARIAAADIDLAAAEKTAAAIESEGGKALA
LQWDLSDLGSIDAHVAAIERQFGPVDILVNNTGGPPPTTVSGQDPTLWNQYFQSMVLSVI
AITDRVLPEMRARKWGRIVTSTSSGVVAPIPNLGISNALRLSLVGWSKTLAREVGRDGIT
VNIVLPGRISTGRITFLDEQKAKRENRSIDDVVTESTGSIPLGRYGRPEEYGNVVTFLAS
EPASYLTGSVIRVDGGMIQSI
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggatttcggcctgaaggacaagacggccctggtgcttggcgccggcggcggactgggc
agtgcgattgccgccaagcttgcgcgcgaaggcgccagaattgccgcggcggatatcgat
ctcgccgccgctgagaagaccgcggctgcgatcgaatccgaaggtggcaaggcgctcgca
ctgcaatgggacctttccgatctcggttcgatcgatgcccatgtcgctgcaatcgagcgc
cagttcggaccggtcgatatcctcgtcaacaataccggtggcccaccgccgaccaccgtc
tccggccaggatccaacgctctggaaccagtatttccagagcatggtgctctctgtcatc
gccattaccgatcgggtgctgcctgagatgcgggcgcgcaaatggggacgcatcgtcacc
tcgacctcgtcgggcgtggtcgcaccgatccccaatctcggcatttcaaacgcgctgcgc
ctgtcgctggtgggctggtcgaaaacgctggcgcgcgaggtcgggcgcgacggcatcacc
gtcaacatcgtcctgcccggccggatctccaccggccgcatcaccttcctcgacgaacag
aaggccaagcgcgaaaaccgctccatcgatgacgtcgtcactgagagcaccggcagcatt
ccgctcggccgctatggccggccggaagaatatggcaatgtcgtcaccttcctggcgagc
gagcctgcctcctatctgaccggatcggtgatccgcgtcgatggcggcatgatccagagc
atctga
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