Rhodoferax lithotrophicus: MIZ03_1687
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Entry
MIZ03_1687 CDS
T10289
Name
(GenBank) NAD-specific glutamate dehydrogenase
KO
K15371
glutamate dehydrogenase [EC:
1.4.1.2
]
Organism
rlh Rhodoferax lithotrophicus
Pathway
rlh00220
Arginine biosynthesis
rlh00250
Alanine, aspartate and glutamate metabolism
rlh00430
Taurine and hypotaurine metabolism
rlh00910
Nitrogen metabolism
rlh01100
Metabolic pathways
rlh01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rlh00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
MIZ03_1687
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
MIZ03_1687
00220 Arginine biosynthesis
MIZ03_1687
09106 Metabolism of other amino acids
00430 Taurine and hypotaurine metabolism
MIZ03_1687
Enzymes [BR:
rlh01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.2 glutamate dehydrogenase
MIZ03_1687
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Gene cluster
GFIT
Motif
Pfam:
Bac_GDH_CD
GDH_C
GDH_ACT1
GDH_ACT2
GDH_HM3
GDH_ACT3
GDH_HM1
GDH_HM2
ELFV_dehydrog
Motif
Other DBs
NCBI-ProteinID:
BCO26801
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All DBs
Position
1711424..1716193
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AA seq
1589 aa
AA seq
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MTHAPLAALYTYTLENAGAASQNLADFVQAYFDKTDPDELQERGSPKLLALANAHRRLLN
AEPDAHGVRIRVYNPTLAEDGFVSEHTIIQIVHEDMPFLVDSVTMVVNRSGRVAHWIVHP
LLAVERNTEGRVIRVATAQHKESSSHAISSLILLECDRILSPADREQLVSDLSSVLCDVR
ASVADWGLMLQHLQTVRNAAAGVGLSTTGQTEGINFLGWLEDQHFTFLGARDYTLAHEQD
GISLIAVPDSGLGILRGEPKTPVSRLLSDAMAFVDSDQLVLVTKAMTRSTVHRPSWLDCL
IVKRFDADGRLVGESRFLGLYTSKAYAALVSDIPLIRQRAADVMAAVDVLPESHAAKSLQ
SILYAYPRDELFQIETATLLEHALGILRLQESQRPRIFLRRDPFGRFTSVQVFVPRDRYN
TELRIKIGEELSRAFDGLSIEFTPMLTDSPLARIHYLIRARQQAPKNVDVSMLELRIAQL
AQRWEDDCKQALVQVHGESQGLTLATRFAKGFPTAYQEVFPGPMAADDVQVLSELSADMP
MAVRLYRPLDSTPGLVRFKIFSRAKVALSDSLPVLERMGVRVLDEHPYGVVDSADRARAT
ECWIHDLGLQLATSVEFSEIRQRFEVLFVQAWRKECDSDDLNKLVLVSTLDARAIAVLRA
YTRYFKQLDFPYSTSYLEDTLVKNASLAQALYQLFAARFDPDKQLDSTASQTSLNTWIDT
QLSAVASLEEDRILRQYHRAILATVRTNVWQMAAAGGYKSYMSFKFHSREVPGMPEPKPL
FEIWVYSPRVEAIHLRIDKVARGGLRWSDRREDFRTEILGLVKAQQVKNTVIVPVGSKGG
FVLKNPPPTGDREAFMAEGIACYKLLLSGMLDLTDNLVHGQVVAPQNVVRHDEDDPYLVV
AADKGTASFSDIANSVSAEYGFWLGDAFASGGSVGYDHKKMGITARGAWESAKRHFRALS
HNIQTTPFTVVGIGDMSGDVFGNGMLLSKHIQLVAAFDHRHIFIDPTPDVSRSFAERQRL
FDLPRSSWDDFDRGVLSQGGGIYARSAKSISLSKMAREALGIEAQELSPSDLLHAILQAP
VDLIYNGGIGTYVKSTSESHLQVGDKAGDTFRVNGQQLRCKVLVEGGNLGCTQLGRIEYA
QNGGLIYTDAIDNSAGVDCSDHEVNIKILLDRVVEAGDLTLKQRNELLASMTEEVGHLVL
ADNYYQTQALDVANHRPLYFLAGQQRLMQWLEGAGRLNRKIEFLPTDEEIARRRAHQLGL
TAPEGAVVLAYAKMSVFDDLLASNLPDDPYFTRVLKAYFPKALTERFASAIDQHPLKREI
IATFVANTVVNRTGATFVNFLAAEAGATVADVVRAYTLAREIFDLEALWDQIDALDGSVA
SSLQLDLLCKLIAIAQRASRWMLRARSKSSDLPTLMARYQPGARELRANLPQWLPTRATE
QWAQATQKLVQAGVDADLAENLSALEFIFPALYLVDLTEQAETTLAQAARVYFGVENVLA
LGAWRAQIARLPTDTLWQTQARGSAREDVYAIANQISQSVLMRFESVDAWAEFHAPSIER
LSRLLQTITTQVADLAPVSVALRELRHLV
NT seq
4770 nt
NT seq
+upstream
nt +downstream
nt
atgacccatgccccccttgctgccctgtatacctacaccctggaaaatgcaggtgccgct
tctcaaaatcttgctgattttgttcaggcctattttgataaaacagatccagacgagctg
caagaacgtggatcacccaagcttctggcacttgccaatgcgcatcgccgtttactgaat
gctgaaccagatgcccatggtgtgagaattcgggtctacaaccccacgcttgcagaagat
ggttttgtcagtgaacacaccatcattcaaatcgtccatgaagacatgccttttttggtt
gattcggtcaccatggttgtgaatcgaagtggtcgtgtcgctcactggattgttcaccct
ttgctggctgttgagcggaataccgaaggtcgcgtcatccgggtggccacagcccagcat
aaagaaagcagctcccacgccatttcatccttgattttgctggagtgtgaccggattttg
agtcccgcagatcgtgagcaactggtatctgatctatccagtgtcttgtgtgacgtgcgt
gcgtctgtcgccgattggggcctcatgctgcaacatcttcaaaccgttcgaaatgctgca
gcaggggttgggctatcaaccacggggcaaaccgaaggaatcaattttcttgggtggctt
gaggatcaacactttaccttcttgggggcacgtgattacaccctggcacacgagcaagat
ggcatcagcctgattgcggtaccggattccggcttggggatattgcgtggtgaacccaaa
acaccggtcagccgcttactgtcagatgctatggcgtttgtcgattcagatcagttggta
ttggttaccaaagccatgacacgttcaacagtgcatcgaccttcatggttggattgtctt
atcgtgaaacgatttgatgcagatgggcggcttgtaggtgagtcacgattcttaggtctt
tatacctccaaggcctatgctgcgctggtgagtgacataccgctgatcaggcaacgtgct
gctgatgttatggcggcagtggatgtcttgccggagagccatgcagccaaatcattgcaa
tccattctgtatgcctatccccgtgacgagttgtttcagattgagacggccacattactg
gagcatgcactgggtattttgcgtctgcaagaaagtcagcgacctcgtatatttttgcgg
cgtgacccttttggtcgttttacatcggtacaagtgtttgtcccacgtgatcgctacaac
accgagttacggatcaagattggcgaagaactcagccgtgcgtttgatggcctctcgatc
gagttcacaccgatgctgacggacagtccactggcacgtatccattatttgattcgagcc
cgtcagcaggcacccaaaaatgtcgatgtttcgatgctggaactgcgcattgcacaactc
gctcaacgttgggaagacgactgcaagcaagcattggttcaggtgcacggtgaaagccag
ggtctgactttggccacacgttttgccaagggatttccgacggcctatcaagaagtgttt
cccgggcccatggcggcagacgatgtgcaagtgttgtctgagttatctgccgacatgccc
atggctgttcgactctaccgtccgcttgacagtacgcccgggttggtgcgtttcaaaatt
ttcagccgtgccaaggtggcactatcagactctttgcccgtgcttgagcgcatgggtgta
cgtgtgctggatgaacatccgtatggtgtggtggacagtgcagatagggcacgagctact
gaatgctggatacatgaccttggcctgcagctggccacatcggttgaattctcggaaatt
cgccaacgctttgaggttttgtttgtgcaggcatggcgaaaagaatgtgacagcgacgac
ctcaacaagttggttcttgtcagcacgctggatgcccgcgccatagccgtgttaagagcc
tatacaaggtacttcaagcaactggatttcccttacagcacgagttatctggaagacacg
ttggtcaaaaatgcaagccttgcgcaagccttgtaccagttgtttgcagcgcgttttgat
ccagacaaacagttagacagcaccgcctcacaaaccagtctgaacacttggattgacacc
caactcagtgcggtggccagcttggaagaagatcgtatcttgcgtcaataccaccgggct
attctggccacggtgcgtaccaatgtgtggcaaatggctgctgcgggcggttacaagtcc
tacatgagcttcaaattccattcccgcgaggtgccgggtatgccagagcccaaaccattg
tttgaaatttgggtgtactccccgcgtgttgaggctattcacttgcgcattgacaaggtt
gcgcgtggtgggcttcgttggtcggatcggcgtgaggatttccgtacggaaattttgggc
ttggtcaaggctcagcaagttaaaaacacagtgattgtcccggttggctcaaaaggtgga
tttgtcctgaaaaatccccccccgaccggtgaccgagaggcctttatggccgaaggtatt
gcttgctataaattgcttttgtctggcatgttggacttgaccgacaacctggttcatggt
caggttgttgcaccacaaaacgtggtgcgccatgatgaagatgacccctacttggtggtg
gcggccgacaaaggaactgcaagtttttcagatattgccaacagtgtttctgctgaatat
ggtttttggttgggtgatgcctttgcatcaggcggttccgtgggttacgaccataaaaaa
atgggcatcacagcacgtggcgcctgggagtcggccaaacggcatttcagggccttgtcg
cacaacatccagaccacgcccttcacggttgtgggtattggtgacatgtcgggtgatgtg
tttggcaatggcatgttgttgtccaaacatattcaattggtagcggcgtttgaccatcga
cacatcttcattgacccaacccccgatgtttcacgcagtttcgctgagcgtcaacgcctg
tttgatttgccacgttccagctgggatgactttgaccgtggtgtcctctcgcaaggcggt
ggtatttacgcccgctcggccaagtccatcagcttgtccaagatggcacgcgaggccttg
ggaatagaggcacaggaactatcacccagtgatttgttgcatgctattttgcaagccccg
gtggacttgatctataacggcggcattggcacctatgtcaaatcgacctccgagagccat
cttcaagtgggtgacaaggccggtgatacctttcgcgtcaacggtcaacaattgcgctgc
aaagtgttggtggaaggcggcaacctgggttgcacccagttgggccgcatcgaatacgca
caaaacggtggtttgatttacaccgatgccatcgacaactcggccggggtggattgctct
gatcacgaagtcaatatcaagatattgcttgatcgcgtggttgaggctggggatctgacg
ctcaagcagcgcaatgagctgctggcttccatgaccgaagaggttggtcatttggtgttg
gctgacaactattaccagactcaggctttggatgtggccaaccatcgccccctgtacttt
ctggctggacagcagcgcttgatgcaatggctcgaaggtgctggtcgactgaatcgcaag
attgagtttttacccacggacgaagaaattgcccgcagacgtgcacaccagctcggcctg
actgcacccgaaggtgccgtggttctggcctatgccaagatgtcggtgtttgatgatttg
ttggccagcaatttgcctgacgacccctatttcacccgggttctcaaagcctatttcccc
aaggcgctgaccgagcggtttgcgtccgccattgatcagcaccctctcaagcgcgaaatt
attgccacctttgtggccaacacggtggtgaaccgaaccggggccacctttgtcaatttc
ctggccgcagaagcgggtgcgacggtcgctgatgtggtgcgcgcctataccttggcgcgt
gaaatttttgatctcgaagctttgtgggatcagatcgacgcattggatggcagtgtggcc
agcagtttgcagctcgatttgttgtgcaaactcattgccattgcacaacgtgcgtcacgc
tggatgctgcgcgcacgctccaaatcgtcagacttgcctaccttgatggcacgttatcag
cccggtgcgcgtgaactcagggcaaatttgccccaatggctacccacccgtgcaactgaa
caatgggctcaggccacacaaaagttggtgcaggctggtgttgatgctgatttggctgaa
aatttgagtgccctggagttcattttcccggcgctgtacctggttgaccttacggaacaa
gccgagactacattggcccaagccgcgcgagtctattttggtgtggaaaacgtgcttgcc
ttaggggcatggcgtgcccaaatcgcccgcttgcccaccgacacgctctggcaaacccaa
gccagaggcagtgcccgtgaagacgtgtacgccatagccaaccagatcagccaaagtgtg
ttgatgcgttttgagagtgtggatgcctgggcggagtttcacgcgccaagcatagagcgg
ttgtcccgtttattgcaaaccatcaccacgcaagtggctgacctggcaccagtgtcggtg
gctctgcgtgaactgcgccacctggtgtga
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