KEGG   Rhodoferax lithotrophicus: MIZ03_1987
Entry
MIZ03_1987        CDS       T10289                                 
Name
(GenBank) endonuclease III
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
rlh  Rhodoferax lithotrophicus
Pathway
rlh03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rlh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    MIZ03_1987
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rlh03400]
    MIZ03_1987
Enzymes [BR:rlh01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     MIZ03_1987
DNA repair and recombination proteins [BR:rlh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     MIZ03_1987
 Prokaryotic type
     MIZ03_1987
SSDB
Motif
Pfam: HhH-GPD HHH RecR_HhH Ogg-HhH EndIII_4Fe-2S HHH_8
Other DBs
NCBI-ProteinID: BCO27100
LinkDB
Position
complement(2017839..2018483)
AA seq 214 aa
MKRADIEAFFATLAAANPHPQTELEYASVFELLTAVLLSAQATDVSVNKATRSLFVLANT
PQKMLDLGLEGLEAQIKTIGLYHSKARHLLQTCQILVAQHGGQVPRTREALQALPGVGRK
TANVVLNVAFGEPTMAVDTHIFRLGNRTGLAPGKTPLEVEQQLLKRVPAAYLVHAHHWLI
LHGRYICQARAPHCWQCAVASHCDFKPKTTSKSS
NT seq 645 nt   +upstreamnt  +downstreamnt
atgaaacgcgctgacattgaggctttttttgccaccttggctgcggccaacccccacccg
caaaccgagcttgaatatgccagcgtgtttgaactgctgaccgccgtgctgctgtctgcc
caggccaccgatgtcagtgtcaacaaggccacccgcagcctgtttgtgctggccaataca
ccgcaaaaaatgcttgatcttggcctggaggggcttgaagcccagatcaaaaccattggt
ctgtaccacagcaaggcgcgccatctgctgcaaacctgccagatactggtggcgcagcac
ggcggccaggtgccccgcacccgcgaggccttgcaggccctgcccggtgttggccgcaaa
accgccaatgtggtgctcaacgtggcctttggtgagcccaccatggcggtggacacgcac
atttttcgcctgggcaaccgcaccggtctggccccgggcaaaacgccgctggaggtcgaa
cagcaattgctcaaacgtgtccccgccgcctacctggtgcacgcccatcactggctgatt
ttgcacggacgctacatctgccaggcccgcgcaccccattgctggcaatgtgccgtcgca
tcacactgcgatttcaaacccaaaaccacctccaaatcatcatga

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