Rhodoferax lithotrophicus: MIZ03_3026
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Entry
MIZ03_3026 CDS
T10289
Name
(GenBank) isoleucine--tRNA ligase
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
rlh Rhodoferax lithotrophicus
Pathway
rlh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rlh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
MIZ03_3026
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rlh01007
]
MIZ03_3026
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rlh03016
]
MIZ03_3026
Enzymes [BR:
rlh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
MIZ03_3026
Amino acid related enzymes [BR:
rlh01007
]
Aminoacyl-tRNA synthetase
Class I (U)
MIZ03_3026
Transfer RNA biogenesis [BR:
rlh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
MIZ03_3026
Prokaryotic type
Other AARSs
MIZ03_3026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
zf-FPG_IleRS
tRNA-synt_1e
tRNA-synt_1f
tRNA-synt_1_2
BIR
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
BCO28129
UniProt:
A0ABM7MP62
LinkDB
All DBs
Position
3093377..3096268
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AA seq
963 aa
AA seq
DB search
MTTQAPNTDASGKADYRSTLNLPDTPFPMRGDLPKREPQWVKQWEEQGLYPKLREARQGA
PKFILHDGPPYANGQIHMGHAVNKILKDMIVKARQLKGLDAAYIPGWDCHGLPIENAIEK
KFGRKLARDDMQAKSRAYATEQIDQQRADFKRLGVLGDWDHPYRTMDFKTEANEIRAFKR
VIERGFVYRGLKPVYWCFDCGSSLAEFEIEYADKKSQTLDVGFLCNEPAQLAAAFGLSAL
EKEAFAVIWTTTAWTIPANQALNAHPELTYALVDTERGLLVLAQDLVTACLERFGLTGNV
LATANGKALGGIHFKHPLAHVDAGYDRLSPIYLAEYVSATDGTGIVHSAPAYGVEDFNSC
VAHGMAYDDILNPVQGNGVYASELPLFGNQQIWKACPVIIDALRDAGRLLATENIVHSYP
HCWRHKTPVIYRAAAQWFIRMDEGVGIFTKDKAPQTLRKIALAAIENTAFYPENGKVRLR
DMIAGRPDWCISRQRSWGVPLPFFLHKDSGELHPQTMEILDIAADMVEAGGIEAWSKAST
EDILGQVGCAADAPHYTKSSDILEVWFDSGTTHTTVLKGSHAGAGHEDGPEADLYLEGHD
QHRGWFHSSLLTACAMYGRAPYKGILTHGFTVDSKGHKMSKSAGNGVDPQETSKKLGAEI
IRLWVAASDYSGDIAGDDKILARVVDTYRRVRNTLKFLLANTQDFDPSVDTVPLADMLEI
DRYALSRAAQLQADVLAHFEIYEFHPVVAKLQIYCSEDLGSFYLDILKDRLYTTAPKSLA
RRSAQTALWQITQAMLRWMAPFLSFTAEEAWSVLGAAGKTPQATRESIFMDTYSAMGEVD
VGLLAKWARIREIRDAVNKDIETLRANGQVGSSLQANVMLTVGPDDHALLASLGEDLRFV
FITSAIDLVAGDAMSISTRASNGIKCERCWHYRDDIGVDTAHPTLCGRCTSNLFGAGETR
TVA
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgaccactcaagcccccaacaccgatgcctccggcaaagctgattaccgcagcaccctg
aatctgcccgacaccccgttcccgatgcgcggcgacctgcccaagcgggaaccccaatgg
gtcaagcaatgggaagaacaaggcctgtaccccaaactgcgcgaagcccgccaaggtgcc
cccaagttcatcctgcacgacggcccaccctatgccaacggccaaatccacatgggccat
gccgtcaacaagatcctgaaagacatgatcgtcaaggcgcgccagctcaagggcctggac
gcggcttacatccccggctgggactgccacggcctgccgattgaaaacgcgattgaaaag
aaatttggccgcaaactggcccgtgacgacatgcaggccaagagccgcgcctacgccacc
gagcagattgaccagcaacgcgccgacttcaagcgcctgggcgtactgggtgactgggat
cacccctaccgcaccatggatttcaagaccgaagccaatgaaatccgcgccttcaagcgc
gtcatcgaacgcggttttgtctaccgcggcctcaaaccggtgtactggtgttttgactgc
ggctccagcctggccgagttcgaaattgaatacgccgacaaaaagtcacaaacgctggat
gtcggctttttgtgcaacgagcccgcccaactcgccgctgcgtttgggctaagcgctctc
gaaaaagaagcctttgccgtcatctggaccaccactgcctggaccattcccgccaaccag
gccctcaacgcccacccggagttgacctacgcgctggtcgacaccgagcgtggcctgctg
gtgctggcgcaagacctggtcaccgcctgcctggagcgctttggcctcaccggtaatgtg
ttggccaccgccaatggcaaagcgctgggtggcattcacttcaaacacccgttggcccac
gtggatgcgggctatgaccgtttgagcccaatctacctggccgagtacgtgagtgccacc
gacggcaccggcatcgtgcactcggccccggcttatggcgtagaggatttcaactcctgc
gtggcacacggcatggcctacgacgacatcctgaacccggtgcagggcaacggtgtctac
gcgtccgagttacctctgtttggcaaccagcaaatctggaaagcctgcccagtcatcatt
gacgcgctgcgcgatgcgggccgcctgttggccaccgagaacatcgtgcacagctaccca
cactgctggcgccacaaaaccccggtgatctaccgcgccgccgcccagtggttcatccgc
atggacgagggcgttggcattttcaccaaggataaagcgccgcaaaccctgagaaaaatt
gcgctggcagctatcgaaaacacagcgttttacccagaaaacggcaaggttcgcctgcgc
gacatgatcgccggccggcccgactggtgcatctcccgccagcgcagctggggcgtgccc
ctgcccttcttcctgcacaaggacagcggcgagctgcacccccagaccatggaaattctg
gacattgccgccgacatggtcgaggccggtggcatcgaggcctggagcaaggccagcacc
gaagacattctgggccaagtgggctgcgccgccgatgcgccccactacaccaagagcagc
gacattctggaagtctggtttgactccggcaccacccacaccaccgtgctcaaaggttcg
cacgccggtgccggccatgaagacgggccggaggccgacctgtacctggagggccacgac
cagcaccgcggctggttccactccagcctgctgaccgcttgcgccatgtatggccgcgcc
ccctacaaaggcattctgacccacggcttcacggtggacagcaagggccacaagatgagc
aagagcgcgggcaacggtgtcgatccgcaggaaaccagcaagaagctcggcgcagaaatc
atccgcctgtgggtggctgccagcgactattcgggcgacatcgccggtgacgacaaaatc
ctggcccgcgtggtggacacctaccgccgggtgcgcaacacgctgaaattcctgctggcc
aacacgcaagactttgatcccagcgtggataccgtgccactggctgacatgctggagatt
gaccgctacgccctgagccgggctgcgcaattacaggctgatgtgctggctcattttgaa
atctatgaatttcacccggtagtggccaagctgcagatttactgctcggaagacctgggc
tcgttctacctcgacatcctgaaagaccggctctacaccaccgcgcccaagtcactggca
cgacgcagtgcacaaaccgcgctgtggcagatcacccaggccatgctgcgctggatggcc
ccgtttttgagcttcaccgccgaggaagcctggagcgtgctgggggctgcgggcaaaaca
ccgcaagccacccgcgagtccattttcatggacacctacagtgccatgggtgaggtggat
gtcggcctgctggccaagtgggcacgtatccgcgagattcgtgacgcggtcaacaaagac
attgaaaccctgcgcgccaatggtcaggtgggctcttcgctgcaggccaatgtgatgctc
acggttggcccggatgaccacgctttgctggccagcctgggcgaggacttgcgctttgtg
ttcatcacatctgctattgacttggtagctggtgacgccatgtccataagcaccagagcc
tcaaatggcattaaatgtgagcgctgctggcattaccgcgacgatattggcgtggacacc
gcccaccccaccctgtgtggccgctgcaccagcaacctgtttggcgcgggcgaaacccgc
acggtggcctga
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