Roseobacter litoralis: RLO149_c034490
Help
Entry
RLO149_c034490 CDS
T01572
Symbol
patB
Name
(GenBank) cystathionine beta-lyase PatB
KO
K14155
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
rli
Roseobacter litoralis
Pathway
rli00270
Cysteine and methionine metabolism
rli00450
Selenocompound metabolism
rli01100
Metabolic pathways
rli01110
Biosynthesis of secondary metabolites
rli01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
rli00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
RLO149_c034490 (patB)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
RLO149_c034490 (patB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rli01007
]
RLO149_c034490 (patB)
Enzymes [BR:
rli01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
RLO149_c034490 (patB)
Amino acid related enzymes [BR:
rli01007
]
Aminotransferase (transaminase)
Class II
RLO149_c034490 (patB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
HapK
Motif
Other DBs
NCBI-ProteinID:
AEI95390
UniProt:
F7ZLZ6
LinkDB
All DBs
Position
3509138..3510310
Genome browser
AA seq
390 aa
AA seq
DB search
MSFNDPIERRGTHSSKWDMMEKLYDVPQQDGIAMWTADSDYATAPCVIDALRRAADHGVF
GYMPIHDDYLNAIQWWMKTRHNWDIDTSWALTSQGLGNAIALCLDLWTDPGARVVIFTPV
YHEFQIKIEKAGREAVTCPLKHTGDSYVLDLEDAQSRLDGSEQMLIWCSPQNPSGRVWTT
DELRGIAEFAARNDLILVSDEIHHDLVFPDHTFVPMHIAAPEVEDRLIVLTAASKTFNIA
GQRTGNMIIPDAKLRKEMQHRLNTLDYKPAALSLQMITAAYSPEGAKWADAQIRHLDQNR
KTFDAAIATIPGVTSMPLQATYLAWVDFSGTGMSYDEISQRVRKSARIAPSAGPDFGPGG
ETFLRFNLATQHHRVEEACARLKDAFSDLQ
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgtcattcaacgatcccatcgaacgtcgcggcacgcacagcagcaaatgggacatgatg
gaaaagctctatgacgtgccgcagcaagacggcatcgccatgtggaccgcagacagcgac
tacgccaccgccccttgcgtgatcgacgctttgcgccgcgcggcggatcacggtgtcttt
ggctatatgccgatccatgatgactatctgaatgccattcagtggtggatgaaaacgcgc
cacaactgggacatcgacacctcatgggcgctgacctcgcaagggttgggcaatgccatc
gcgctgtgccttgacctctggacggaccccggcgcgcgggtggtgattttcacgcccgtc
tatcacgaatttcagatcaagatcgaaaaagcgggccgcgaggcggtgacctgtccgctc
aaacacacaggtgacagctatgtgcttgaccttgaggacgcacaatcgcgccttgatggc
tctgaacagatgctgatctggtgctcaccgcaaaacccatcgggccgggtctggacaaca
gacgagttgcgcgggattgcggagtttgccgcgcgaaacgacctgatccttgtgtccgat
gaaatacaccatgatctggtattccccgaccacacctttgtgcccatgcacatcgccgcc
cccgaggtcgaggatcgcctgatcgtcctcacggcggcctccaagaccttcaacattgca
ggccagcgcaccggcaacatgatcatcccggatgcgaaactgcgtaaagaaatgcagcac
cggctcaatacgctcgactacaaacccgcagcactgagcctgcaaatgatcactgccgcc
tattcgcccgaaggcgccaaatgggccgatgcgcagatccggcacctcgatcagaaccgc
aagacctttgatgcggcaattgcaacgatccccggcgtcacctccatgccgctgcaggcg
acatatctggcttgggttgatttctcagggaccgggatgagctatgatgagatatcacag
cgcgtcaggaaatccgcccgtatcgcgccaagcgccgggcccgatttcggtccgggcggg
gagacattcctgcggtttaatctcgccacgcagcaccacagggtcgaagaggcctgcgcc
cgcttgaaagacgccttcagcgatctgcaatag
DBGET
integrated database retrieval system
