KEGG   Rhodocaloribacter litoris: GQ464_005540
Entry
GQ464_005540      CDS       T09819                                 
Symbol
cas5e
Name
(GenBank) type I-E CRISPR-associated protein Cas5/CasD
  KO
K19125  CRISPR system Cascade subunit CasD
Organism
rlo  Rhodocaloribacter litoris
Brite
KEGG Orthology (KO) [BR:rlo00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rlo02048]
    GQ464_005540 (cas5e)
Prokaryotic defense system [BR:rlo02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-E factors
    GQ464_005540 (cas5e)
SSDB
Motif
Pfam: Cas_Cas5d
Other DBs
NCBI-ProteinID: QXD16412
LinkDB
Position
1330343..1331083
AA seq 246 aa
MTYTLLLRLAAPLQAWGLQSRFSIRDTAREPTKSGVLGLVCAALGRPCHAAIDDLRALRL
AVRVDREGLVRRDFHTAQNVLIASNTARQIERGRPKLKDTEPSVRYYLADAWFTVALAGP
DRNLLQAIDVALGAPRWPLALGRKACVPGWPVRIVQEDGTPLGPLAGHPLEVLRAFRDPL
GDDAPTAPEDGWRFVLDADVPHPALRVAQIRIQPDDPLSFHNRRFLPRRVVVGFASPTGD
AGVSRE
NT seq 741 nt   +upstreamnt  +downstreamnt
atgacgtacacgctgctcctgcggctggcggcccccctgcaggcctggggcctccagagc
cgcttctccatccgcgacaccgcccgcgagccgaccaagagcggcgtcctcgggctggtc
tgcgccgccctcgggcgcccgtgccatgccgctatcgacgacctccgtgccctccgcctg
gccgtccgcgtcgaccgggagggcctcgtgcgccgcgacttccacacggcccagaacgtg
ctcatcgccagcaacacggcgcggcagatcgagcgcggccggccgaagctcaaggacacc
gaaccctcggtgcgctactacctggccgatgcctggtttacggtggccctcgccggcccg
gaccgcaacctgcttcaggccatcgacgtggccctgggggcaccccgctggccccttgcc
ctcgggcgcaaggcctgtgtgccgggctggcccgtgcggatcgtgcaggaggacggcacc
cccctcggaccgcttgcgggccatccgctcgaggtgctccgcgccttccgcgaccccctc
ggggatgacgcgccgacggcccccgaggacggatggcgcttcgtcctcgatgccgacgtg
ccccacccggccctgcgcgtggcgcagatccggatacagcccgacgacccgctctcgttc
cacaaccggcggttcctgccccggcgggtcgtcgtcggctttgcctccccgaccggggac
gccggcgtgtccagagaatga

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