Rhodocaloribacter litoris: GQ464_007520
Help
Entry
GQ464_007520 CDS
T09819
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
rlo
Rhodocaloribacter litoris
Pathway
rlo01501
beta-Lactam resistance
rlo01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
rlo00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GQ464_007520
01503 Cationic antimicrobial peptide (CAMP) resistance
GQ464_007520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rlo03036
]
GQ464_007520
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rlo02000
]
GQ464_007520
01504 Antimicrobial resistance genes [BR:
rlo01504
]
GQ464_007520
Chromosome and associated proteins [BR:
rlo03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
GQ464_007520
Transporters [BR:
rlo02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
GQ464_007520
Antimicrobial resistance genes [BR:
rlo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
GQ464_007520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_3
HlyD_D23
Biotin_lipoyl_2
Biotin_lipoyl
DUF5538
DUF6410
Motif
Other DBs
NCBI-ProteinID:
QXD16776
LinkDB
All DBs
Position
complement(1835137..1836417)
Genome browser
AA seq
426 aa
AA seq
DB search
MERVSSVASREEAPRRRRVRGWQVAAGLLVLSVGGLLAYAFWPVLTGQGDEAGRPEDAHA
AAPPVAVEAVVVSPVTFPLRAEATGRLAPWRQAVLSAETSGRVVARQVEEGDYVTAGQEL
LRLDDREARLRLEEAEAALLKARSEYAVQLSRDGVPAVDTTRLAEARRAWTAAQAAHAEG
ALSDDELEAARRRYEAALLLGGTMREAVQRAVTGLAEAEQRVAQARLQLSRTRITAPFAG
RVADLQAEVGQHVAPGQALLTLLDDRRMKVEVDALESDIVHLRRGATAQVRLPALADTVV
TGTIHSINPRVDTKTGAGRVTVAVPNPGGRLLSGLFAYVALETRRLPDRLVVPAEAVLVR
QGRDLVFVVRGGRAQWQYVTPGPQSGDYVVLVEGVAPGDTVAVAGHHALAHDAPVEVAAV
HPAFRE
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggaacgtgtttcttcggtagcgtcgagggaggaggcgccccggaggcggcgggtgcgg
ggctggcaggtggccgcggggctgctggtgctgtcggtgggcgggctgctggcgtacgcc
ttctggccggtgttgacggggcagggggacgaggcggggcgccccgaagacgcccatgcc
gccgcgccgcccgtggccgtcgaggcggtggtcgtctcgcccgtgacctttccgttgcgg
gccgaggccacgggccggctggccccctggcggcaggcggtgctcagcgccgagacgagc
ggccgggtggtggcgcggcaggtcgaggaaggggactatgtgacggcgggccaggaactc
cttcgcctggacgaccgggaggcccgcctccggctggaggaggccgaggcggccctgctc
aaggcccggagcgagtacgccgtccagctcagccgcgacggggtccccgccgtcgacacg
acgcggctggccgaggctcgccgggcctggacggccgcacaggccgcccacgccgagggc
gccctctcggacgacgagctggaggccgcacggcgacgctatgaggcggccctgctgctg
ggcgggacgatgcgcgaggccgtgcagcgtgccgtgaccggcctggccgaggccgagcag
cgggtggcgcaggcccgcctccagctgagccggacccgcatcaccgcgccgttcgccggg
cgcgtggccgacctgcaggccgaggtggggcagcacgtcgcccccggccaggccctgctc
accctgctcgacgaccggcgcatgaaggtggaggtggacgccctggaatcggacatcgtc
cacctgcggcgcggcgccacggcgcaggtgcgcctgcccgccctggcggacaccgtcgtc
accggcaccatccattccatcaacccccgcgtcgacacgaagacgggggcggggcgggtg
acggtggccgtgcccaaccccggcggccgcctgctcagcgggctcttcgcctatgtggcc
ctggaaacccggcgccttcccgaccggctggtggtgcctgccgaagccgtgctcgtgcgg
caggggcgggacctggtgttcgtcgtgcggggcgggcgggcacaatggcagtacgtgacc
cccggcccgcagtcgggcgactacgtggtgctggtcgaaggcgtcgcgccgggggatacg
gtggcggtggcggggcatcacgccctggcgcacgatgcgcccgtcgaggtggccgccgtc
cacccggcctttcgcgagtga
DBGET
integrated database retrieval system
