Rhodocaloribacter litoris: GQ464_013385
Help
Entry
GQ464_013385 CDS
T09819
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
rlo
Rhodocaloribacter litoris
Pathway
rlo01501
beta-Lactam resistance
rlo01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
rlo00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GQ464_013385
01503 Cationic antimicrobial peptide (CAMP) resistance
GQ464_013385
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rlo02000
]
GQ464_013385
01504 Antimicrobial resistance genes [BR:
rlo01504
]
GQ464_013385
Transporters [BR:
rlo02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
GQ464_013385
Antimicrobial resistance genes [BR:
rlo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
GQ464_013385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
DUF6286
Motif
Other DBs
NCBI-ProteinID:
QXD14423
LinkDB
All DBs
Position
complement(3219960..3223058)
Genome browser
AA seq
1032 aa
AA seq
DB search
MSLYSLSIRRPVLAIVMSVAILLFGLIGFTFLGVREYPAVDPPIISVSTSYPGANADVIE
SQITEPLEESVNGVDGIRTLTSVSREGRSTLTVEFNLDVDLERAANDVRDRVSRAMNNLP
PDAEPPVVSKADADAQPIVFLNIRSDRRNLLELSRFADEVFKERLQTIPGVSAVQIWGEK
EYAMRIWLDPQRLAAYRLSPLDVRNALQRENVELPSGRIEGDQVELTIRTMSRLEDPEAF
NNLILKENQGQIVRLRDVGRAELGPLNERTVLKRDGIPMVGVVLQPQPGANYIAIADEFY
RRVDQIARDLPPDIELGIGFDVTDYIRDSVTEVQQTIFLALVLVVLIIFLFLRDVRTTLI
PVLVIPVSLVGAFFIMYVAGFSINVLTLLGLVLAIGLVVDDAIVVLENIYAKIEAGKPPL
EAGITGTREIFFAVIATTLALVSVFLPILFLGGLTGRLFREFGVVLGGAVVISSFVALTL
TPMLSTRLLKPHAHHSWFYRKTEPFFVQLNRRYTRSLDAFLRRRWLALPVIAACFALVYL
FFTSLPQELAPKEDRGRIRLFATAPEGATYEYMDAYMDDLIRTIQAEVPEAEAIISVTSP
GFGAASSVNSGFAFLILPPAEERARSQTEIAEALTARVNQMTRARTFVSEPQSLGDRRGG
LPVQYVLLAPSFEKLRETLPRFLEAARREPTFTFVDADLKFNKPELRITIDRERARALGV
SALDIAQTLQLALSAQRVGYFIMDGKQYQVIAQVDRADRNETLDLRTLFVRNAAGEPVQL
DNLVRVSEESSPPQRYRFDRYVSATISAGLAPGKTIGDGIAAMDRLAGEVLDETFATALT
GPSRDFAESASSLLFVFLLALVLIYLVLAAQFESFRDPLIIMLTVPLALAGALFSLWYFG
QTINIFSQIGMIMLIGLVTKNGILIVEFANQRKATGQSIGEAIREGAAARFRPVLMTSIS
TILGILPIALALGAGSESRAPMGIAIIGGMLFGTFLTLYVIPAVYTYLTRRDAAPTLAAT
VPTADAELVEVG
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgagcctctattcgctgagcatccgccgccccgtcctggccatcgtgatgtccgtggcc
atcctgctcttcggcctcatcggcttcaccttcctgggcgtgcgcgagtacccggccgtg
gacccgccgatcatcagcgtcagcaccagctacccgggcgccaacgccgacgtcatcgag
tcacagatcaccgagccgctggaggagtccgtcaacggcgtcgacggcatccgtacgctg
acgtcggtcagccgcgagggccgcagcacgctcacggtggaattcaacctggacgtggac
ctcgagcgggccgccaacgacgtgcgcgaccgcgtctcgcgggcgatgaacaacctgccg
ccggatgccgagccacccgtcgtctccaaggccgatgcggacgctcagcctatcgttttc
ctcaacattcggagcgaccggcgcaacctgcttgagctctcccgcttcgccgacgaggtt
ttcaaggagcgtctgcagacgatccccggcgtcagcgccgtgcagatctggggcgagaag
gaatacgccatgcggatctggctggacccgcagcgcctggccgcctaccggctctccccg
ctcgacgtgcgcaacgccctccagcgtgagaacgtggagttgccctcgggccgcatcgag
ggggatcaggtagagctgacgatccgcaccatgagccgcctcgaagacccggaggcgttc
aacaacctcatcctgaaggaaaaccaggggcagatcgtccgcctgcgcgacgtgggccgg
gccgagctgggcccgctcaacgaacgcaccgtcctcaagcgggacggcatcccgatggtc
ggcgtggtgctccagccccagcccggcgccaactacatcgccatcgccgacgagttctac
cgccgcgtcgaccagatcgcccgggacctgccgccggacatcgagctcggcatcggcttc
gacgtgaccgactacatccgcgactccgtcaccgaggtgcagcagacgatcttcctggcg
ctggtcctggtggtgctcatcatcttcctgttcctgcgcgacgtgcgcaccaccctcatc
ccggtgctcgtcatcccggtctcgctcgtcggcgccttcttcatcatgtacgtggccggc
ttctcgatcaacgtgctgaccctgctggggctcgtgctggccatcgggctggtggtggac
gacgccatcgtggtgctcgagaacatctacgccaagatcgaggcgggcaagccgccgctg
gaggcgggcatcacgggcacgcgcgagatcttcttcgccgtgatcgccacgacgctggcg
ctcgtgtccgtcttcctgccgatcctgtttctgggcgggctgaccgggcggctcttccgc
gagttcggggtggtgctcggcggggccgtcgtcatctcgtcgttcgtggcgctgacgctg
acgccgatgctgagcacgcgcctgctcaagccgcacgcgcaccactcgtggttctaccgg
aagacggagccgttcttcgtgcaactcaaccgccgctacacccgctcgctcgacgccttc
ctgcggcggcggtggctggccctgcccgtcatcgcggcgtgcttcgccctggtctacctg
ttcttcaccagcctgccgcaggagctggccccgaaagaagaccggggccgtatccggctc
ttcgccacggccccggagggcgccacgtacgagtacatggatgcctacatggacgacctc
atccggacgatccaggcggaggtgcccgaagccgaggccatcatctcggtgacgtcgccg
ggcttcggcgccgcctcgtcggtcaactcgggctttgccttcctcatcctgcccccggcg
gaggagcgggcgcggtcccagacggagatcgccgaggcgctcacggcccgcgtcaaccag
atgacgcgcgcccgcacgttcgtctccgagccgcagagcctgggcgaccggcgcggcggg
ctgccggtgcagtacgtcctgctggcccccagcttcgagaagctgcgcgagacgctgccg
cgcttcctggaggccgcccgccgggagccgaccttcaccttcgtcgacgccgacctgaag
ttcaacaagcccgagctgcgcatcaccatcgaccgcgagcgggcgcgcgcgctgggcgtc
tcggcgctcgacatcgcgcagacgctccagctggccctcagcgcccagcgcgtcggctac
ttcatcatggacggcaagcagtaccaggtcatcgcccaggtggaccgcgccgaccgcaac
gagacgctcgacctgcgcaccctcttcgtccgcaacgccgccggcgagcccgtccagctc
gacaacctggtgcgcgtctcggaggagagcagcccgccccagcgctatcgcttcgaccgc
tacgtctcggccaccatctcggccgggctggcgccgggcaagaccatcggcgacggcatc
gccgccatggaccgcctcgccggggaggtgctcgacgagacgttcgccacggcgctgacc
ggcccctcgcgcgacttcgccgagagtgcctccagcctgctcttcgtcttcctcctggcc
ctggtgctgatctacctggtgctggccgcccagttcgagagcttccgcgacccgctcatc
atcatgctcacggtgcccctggccctggccggcgccctcttctcgctgtggtacttcggc
cagacgatcaacatcttcagccagatcgggatgatcatgctcatcggcctggtgacgaag
aacggcatcctgatcgtcgagttcgccaaccagcggaaggcgacggggcagtcgatcggg
gaggcgatccgggagggggcggcagcccggttccgtccggtgctcatgacgagcatctcg
acgatcctgggcatcctcccgatcgcgctggcgctgggcgccggcagcgagagccgcgcc
ccgatgggcatcgccatcatcggcgggatgctcttcggcacgttcctgacgctctacgtc
atcccggcggtctacacctacctgacgcgccgcgacgccgccccgacgctcgccgccacc
gtccccaccgccgacgccgaactggtagaggtgggctga
DBGET
integrated database retrieval system
