KEGG   Ruminococcus lactaris: NQ541_08025
Entry
NQ541_08025       CDS       T08757                                 
Symbol
cas5c
Name
(GenBank) type I-C CRISPR-associated protein Cas5c
  KO
K19119  CRISPR-associated protein Cas5d
Organism
rlr  Ruminococcus lactaris
Brite
KEGG Orthology (KO) [BR:rlr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rlr02048]
    NQ541_08025 (cas5c)
Prokaryotic defense system [BR:rlr02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-C factors
    NQ541_08025 (cas5c)
SSDB
Motif
Pfam: Cas_Cas5d DUF6400 Fn3_Dep-1_5th aRib
Other DBs
NCBI-ProteinID: UWP64704
LinkDB
Position
complement(1708200..1708862)
AA seq 220 aa
MGIGVKVKVWGDYALFSRPEMKVERCSYDVMTPSAARGILEAIYWHPGLKWVIDKIYVKN
PIRFTSVRRNEVKSKISASNVLQVYNGADKPLYLSTKEDIVQRASLILCDVCYIIEAHFE
MTNKANASDNPGKFKDIIMRRLKRGECYHMPYFGCREFPAQFCLCEEKEIHTSYDTVPEK
DLGFMLYDMDYSNLDEIQPMFFRAVMRKGVLDLRNCEVIR
NT seq 663 nt   +upstreamnt  +downstreamnt
atgggcataggtgtaaaagtaaaagtgtggggggattatgctttgttctcaagaccggag
atgaaggttgaaagatgttcttatgatgttatgacaccttcggcagcacgtggaattctg
gaagcaatatactggcatcccggtctgaaatgggttattgataagatttatgtgaagaat
ccaatccgctttacaagtgtcaggcgaaatgaagtaaaaagcaagatatctgccagcaat
gtactgcaagtgtataatggggcagataaaccactttatcttagtacaaaagaagacatt
gttcagagagcctctctaattttatgtgatgtatgctatatcatagaagcacattttgaa
atgacgaataaggcaaatgcatcggacaatcctggaaaatttaaagatattatcatgcgt
cgtttaaaaagaggagagtgctatcatatgccatattttgggtgcagagaatttccggct
cagttctgtttatgtgaagaaaaagagatacataccagttatgatacagtgcctgaaaag
gatctgggatttatgttgtatgatatggattatagtaatctggatgaaatacagccgatg
tttttcagagcagtcatgagaaaaggagtgctggatttacgaaactgtgaggtgatcaga
tga

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