Candidatus Ruthia magnifica (Calyptogena magnifica): Rmag_0155
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Entry
Rmag_0155 CDS
T00438
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
rma
Candidatus Ruthia magnifica (Calyptogena magnifica)
Pathway
rma00300
Lysine biosynthesis
rma00550
Peptidoglycan biosynthesis
rma01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rma00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Rmag_0155
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Rmag_0155
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rma01011
]
Rmag_0155
Enzymes [BR:
rma01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
Rmag_0155
Peptidoglycan biosynthesis and degradation proteins [BR:
rma01011
]
Precursor biosynthesis
Amino acid ligase
Rmag_0155
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
YqeC
Motif
Other DBs
NCBI-ProteinID:
ABL01947
UniProt:
A1AVJ0
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All DBs
Position
complement(180638..182032)
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AA seq
464 aa
AA seq
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MNISQLLANIVQTKIDIEIKGLCLNAQSTQPGDLFIALQGKLTHGADYINQAIDKGCVAI
LVDSKEIECVIPSIRIDNLSQYLQTLANTFYKNAIKVNIISITGTNGKTSVAYFISQLLT
KLGIKNGLIGTLGITHSQQLSLNTTPDILTLYQVLDNYYQNNIHHAILEVSSHALTQDRI
AGLNIKQAIFTNLTQDHLDYHHTLDKYQATKEKLFVLDTVESVILNQDDSHYKHFLNITK
DKKRISYSLGDFDSIKTIEQGFLVQLDHYVFEIPFLGEFNLLNILAALNSVEALGFKRDD
IIPLFYQLLPPPGRMQRIEPHLAWIDYAHTPDAIGNAITTLKKHYPNFKIRIVFGCGGNR
DKDKRAEMGKIASNLADTIILTNDNPRSENPKTIIENILSGIDDSYKLDIIENRQLAIET
AITTLKENECLLIAGKGHETIQQFSDKTIYLNDLEIAQNSTKAI
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaatatttctcagcttttagccaatattgtacaaactaagatagacatagagataaag
ggcttgtgtcttaatgctcaaagcacacaacctggagatttgtttattgcacttcaaggg
aaattaacacacggtgctgattatatcaaccaagcaatcgacaaaggctgcgttgctata
ttagttgactcaaaagagatagaatgtgtcattccatctattcgtattgacaacttatct
caatatttacaaacactggcaaatactttttataaaaatgctataaaagttaatatcatt
agtatcacaggtacgaatggtaaaacttctgttgcctactttatctcgcaattactaacc
aaacttgggattaaaaatggtttaattggcactttaggtatcactcatagtcaacagtta
tcccttaatacaacgccagatattttgacgctttaccaagtattagataattactatcaa
aacaatattcatcacgccatacttgaggtttcttcacacgcactcactcaagatagaatt
gctggattgaatattaaacaagcaatatttaccaatcttactcaagatcatcttgattat
catcacacacttgataaatatcaagcaaccaaagaaaaattatttgttcttgatactgtt
gaatctgttattcttaaccaagatgatagtcattacaaacattttctaaatatcactaaa
gataaaaaacgaatcagctactctctaggtgattttgactcaatcaaaaccattgaacaa
ggctttttagtgcaattagaccattatgtttttgaaatcccatttttaggtgagtttaat
ttactgaacattttggcagcattgaacagtgttgaggcgcttggatttaaacgtgatgat
attattccgctattttatcaactattgccaccacctggtagaatgcaaagaattgagcct
catcttgcttggatagattatgcccatacacctgatgccatcgggaatgccatcaccact
ttgaaaaaacactatccaaacttcaaaattcgtattgtctttggttgtggcggtaaccga
gacaaagataaacgcgcagaaatgggcaaaattgcctcaaatctagcggatactattatt
ttaaccaatgacaaccctaggtctgaaaatccaaaaaccattattgaaaacatcttaagt
ggcattgacgatagttacaaattagacattattgaaaatagacagcttgctatcgaaacg
gcaatcacaacactcaaagaaaatgaatgcttactaattgctggcaaaggacatgaaacc
atacaacaattctctgataaaacaatctacctaaatgacttagaaattgcacaaaatagc
actaaagctatttaa
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