Candidatus Ruthia magnifica (Calyptogena magnifica): Rmag_0427
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Entry
Rmag_0427 CDS
T00438
Name
(GenBank) Radical SAM domain protein
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
rma
Candidatus Ruthia magnifica (Calyptogena magnifica)
Pathway
rma00790
Folate biosynthesis
rma01100
Metabolic pathways
Module
rma_M00988
PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Brite
KEGG Orthology (KO) [BR:
rma00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
Rmag_0427
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rma03016
]
Rmag_0427
Enzymes [BR:
rma01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
Rmag_0427
Transfer RNA biogenesis [BR:
rma03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
Rmag_0427
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
zf-CHCC
Motif
Other DBs
NCBI-ProteinID:
ABL02188
UniProt:
A1AW81
LinkDB
All DBs
Position
466410..467051
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AA seq
213 aa
AA seq
DB search
MINIKLNINEIFYSLQGEGREVGLPSVFIRLTGCPLRCTYCDTEYAFKGNNLMAIDEIIK
KIKQYDTPYICVTGGEPLAQKNCCLLLNELVKNNYQVSLETSGSINIQDVNVSVSIVMDI
KTPDSGEFEQNKYTNIKKLTTKDQLKFVIRSRADFDWSVAILSQYPTAAGTLFSPVFGDI
TPTQLADWILDQQLNVRMQLQLHKLLWGDEKGK
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
ttgattaacatcaaattaaacattaatgaaatattttattcccttcaaggtgaagggcgt
gaagttggcttgccaagtgtgtttattcgtttaacaggctgtccacttagatgcacatac
tgtgatactgaatatgcatttaagggtaataacttaatggcaattgatgaaattattaaa
aaaataaagcaatacgataccccttacatttgtgtgacaggtggtgagccattagcacaa
aaaaactgttgtttattgttgaacgaattggttaaaaataattatcaagtatctttagaa
acaagtggtagtattaatatacaagatgttaatgtttcagtatcaatagttatggatatt
aaaactccagattctggtgaatttgaacaaaataaatacacaaatattaaaaaattaacc
accaaagaccaacttaaatttgtcataaggtcacgtgctgattttgattggagtgtggct
attttaagccaatatcctaccgctgcaggtacattattctcacccgtatttggcgatatt
acaccaacgcaattggcagattggattttagatcaacaattaaatgtgcgaatgcaatta
caattgcataaactactttggggtgatgaaaaaggcaagtaa
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