KEGG   Candidatus Ruthia magnifica (Calyptogena magnifica): Rmag_0947
Entry
Rmag_0947         CDS       T00438                                 
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
rma  Candidatus Ruthia magnifica (Calyptogena magnifica)
Pathway
rma03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rma00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Rmag_0947
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rma03400]
    Rmag_0947
Enzymes [BR:rma01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Rmag_0947
DNA repair and recombination proteins [BR:rma03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Rmag_0947
 Prokaryotic type
     Rmag_0947
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S Ogg-HhH RecR_HhH HHH_8 HHH_5
Other DBs
NCBI-ProteinID: ABL02656
UniProt: A1AXJ9
LinkDB
Position
1009779..1010411
AA seq 210 aa
MNSETRTKMFGRLLKKIPNPTTELNYSTPFELLVAVTLSAQATDKSVNKVTDKLFPIANT
PETIFELGEDTLRDTIRAIGLFNSKAKHIIQACKILIEKYSSSVPETRKELEALPGVGRK
TANVVLNTAFGHPTIAVDTHIYRVANRTAIASGKTVLEVEKKLVKFIPDEYRVPAHHLMI
LHGRYTCKARSPLCTECILLDLCEYEEKNL
NT seq 633 nt   +upstreamnt  +downstreamnt
atgaactctgaaacacgtacaaaaatgtttggaaggttgcttaaaaagatacctaatcca
accacagaattaaattattcaacaccatttgaattgctagtagctgttacattatccgca
caagcaacggataaaagcgttaataaggtcactgataaattgtttccaattgccaataca
cctgaaactatttttgaattaggtgaagacacacttagagatacaataagagccattggc
ttgtttaactcaaaagctaaacatattattcaagcttgcaaaattctgattgaaaaatac
agctcaagcgtaccagaaactcgtaaagaattagaagcactgcctggtgttggtcgtaaa
actgccaatgttgtgcttaatactgcctttggccatccaaccattgcagtggatacgcat
atttatcgtgtagcaaaccgcactgctattgccagtggtaaaaccgtattggaggtagag
aaaaaattggttaaattcatccctgatgaataccgagtgcctgcgcaccacttaatgatt
ctacatggtcgttatacttgtaaagctcgttctccattatgcacagaatgtattttgctt
gatctttgcgaatatgaagagaaaaatctataa

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