Roseicyclus marinus: MACH21_12060
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Entry
MACH21_12060 CDS
T09703
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
rmai
Roseicyclus marinus
Pathway
rmai03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rmai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MACH21_12060 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rmai03400
]
MACH21_12060 (nth)
Enzymes [BR:
rmai01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MACH21_12060 (nth)
DNA repair and recombination proteins [BR:
rmai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MACH21_12060 (nth)
Prokaryotic type
MACH21_12060 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_8
Motif
Other DBs
NCBI-ProteinID:
BDW85029
UniProt:
A0AA48HG78
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All DBs
Position
1263309..1263953
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AA seq
214 aa
AA seq
DB search
MAKQLPYPVMREIFARFQAAEPEPKGELHHTNAFTLVVAVALSAQATDAGVNKATKRLFE
IADTPEKMLALGEEGVIEHIKTIGLFRNKAKNVIKLSRILVEEYGGQVPSSRAALQSLPG
VGRKTANVVLNMWWRFPAQAVDTHIFRLGNRAGIAPGRDVDAVERAIEDHVPAEFQLHAH
HWMILHGRYTCVARKPKCGACLIADLCQYEDKTQ
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcagttgccctatcccgtgatgcgcgagatcttcgcccggtttcaggccgcc
gagcctgagccgaagggcgaattgcaccataccaacgccttcacccttgtcgtcgccgtg
gcgctcagcgcgcaggccaccgatgcgggcgtgaacaaggccaccaaacgcctgttcgag
atcgcggatacgcccgaaaagatgctcgcgctcggcgaagagggcgtgatcgagcatatc
aagaccatcggcctgttccgcaacaaggccaagaatgtgatcaagctcagccgcatcctc
gtcgaggaatatggcgggcaggtgccatcctcgcgcgccgcgctgcaatcgctgcccggt
gtggggcgcaagaccgcgaacgtggtcctgaacatgtggtggcggtttcccgcgcaggcg
gtcgacacgcatatcttccgcctcggcaatcgcgcgggcatcgcgccgggtcgggatgtc
gatgcggtcgagcgcgccatcgaagaccatgttcccgccgaattccagcttcatgcccat
cactggatgatcctgcacggccgctacacctgcgtcgcgcgcaaacccaaatgcggcgcc
tgcctgatcgccgacctgtgccaatacgaggacaagacccaatga
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