Rhopalosiphum maidis (corn leaf aphid): 113549575
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Entry
113549575 CDS
T06065
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 15 isoform X1
KO
K11456
polyhomeotic-like protein 1
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
113549575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rmd03036
]
113549575
Chromosome and associated proteins [BR:
rmd03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
113549575
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
zf-FCS_1
Motif
Other DBs
NCBI-GeneID:
113549575
NCBI-ProteinID:
XP_026806742
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All DBs
Position
4:29934857..29940639
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AA seq
938 aa
AA seq
DB search
MSEASAQQQPATDVQQMQQAQQQQQQQQQQQQQQQQQQQQNQQQQSQQNQQNQQTQQMQQ
PQQIQVMIQQPQGQVDMQQQQSQQQQQPQQVAVASGQQTITMQMSSDGSNGGTVQLPHSS
APMTTIETSGQMQISTIQPQQQQQGQVQMTNIQAQQPGQVQQQHTMQAQTPTQQQQQQTQ
IQQINDWSHGRVQLIQQAGPQFVQYNAQGQLIMPGTMLQHPTSGAIQVIAAPNKQFQSQQ
MLTTAHAHKQVISQGQATSFPTGYAAIPTTTNQTLVIGQLGVISSQPNMKQNEMQQTYTS
CATGRTVQQNAQTMQFSPWQFNASLPQGLTWATPQPQALLTQNHPIFIRGAPQQDGQQQQ
VQTPMFIQSPPPQHLQQHHGQTMVQTSGGVMQNIGQMVSGTTTTTIKSQRADIQPKVVTT
PNGMGNNRQLSILPSGHTIRPNATISTQTTTGIQHLNQMQKAQLKVRPKTGVRQGFSIAP
HKSDAANQTNQTKPLQSPQQSMNTNKMILTSSGQLVPQIQQQQQQQQTVQVQHLQQQQQA
QQQIKLVSMQSPNHQIVSMQSPQVAYQQQQIIKPTTNVMSMSMNSPQKIHIHQLQQGQAI
VSSQPQQQITILDRPVIPVVSCAPQASTQSQLLISPQIQTSTSSMLPPIKSDESPKTSPA
VQTNETSAVVVSIAENTTETTASVSLPVTSNEDNSRDKGLPKALVKPQVLTHVIEGFVIQ
EADQPFPVNRSCTIADISNSAQDKESIKLDEEPPNKKSKTDNNNQDKIKCDSCGKCQELQ
KFKIKKKSKRFCSQECSKIFENSSKTGQTDKKNGKNWECESNGSAGDSSNTASSLDLPNR
MQIDVDPKTDVAPELCSINPLTWTVKDVRKFIGQLTDSEEIAADFESHEIDGQALMLLKE
DHLIRDMSMKLGPALKIFAKLDAMRTENPELQPPATSQ
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaggcatcggcacaacaacagcctgccacagacgtacaacaaatgcaacaagca
cagcaacaacaacagcagcagcagcagcagcaacagcaacagcaacagcaacagcaacaa
aatcaacaacagcagtcccagcaaaatcaacaaaaccaacaaacacaacaaatgcaacag
ccacaacaaatacaagttatgattcagcagccccagggacaagttgacatgcagcagcaa
cagtcacaacaacagcaacaacctcaacaagttgctgtcgcctctggtcagcaaactatt
actatgcaaatgtcgtcagatggatctaatggaggcaccgtgcaactccctcattcatca
gctccaatgacaactattgagacatcaggtcaaatgcaaatttctactatccagccacag
caacagcaacaggggcaagtgcaaatgactaatatacaagctcaacagccaggacaagtt
caacagcaacatactatgcaggcacagacacctactcaacaacaacagcaacaaactcaa
attcaacaaatcaatgactggagtcatggacgtgttcagttaattcaacaagctggtcct
cagtttgtacagtacaatgctcaaggtcaattaatcatgcccggaacaatgttgcaacat
cctacctctggtgctatacaagtgattgcagctcctaataaacaatttcagtcacaacag
atgctcaccacagcacatgctcataaacaggtaatatcgcaaggacaggcaacgtcattt
ccgactggatatgctgctataccaactactactaaccagactcttgtcatcggccaatta
ggggtgataagtagtcaaccaaatatgaaacaaaatgaaatgcaacaaacatacacaagt
tgtgctactggaagaactgtacaacaaaatgctcaaacaatgcaattttcaccatggcaa
tttaatgcatcacttcctcaaggactcacttgggctacaccacagcctcaagcattatta
acccaaaatcatccaattttcataagaggtgcacctcagcaagatggtcaacaacaacaa
gtacaaactcctatgtttatacaaagccctcctcctcagcaccttcaacaacaccatggc
caaactatggtgcaaactagtggtggtgttatgcaaaacattgggcaaatggttagtggc
accacaactactactattaaatcacaacgtgcagatatacaacccaaagttgttacaaca
cctaatggtatgggtaataacagacaactttccatactaccatcgggacatacaattcgg
ccaaatgctacaatttctactcaaactactactggtatacagcatttaaatcaaatgcaa
aaagctcaactcaaagttagacctaagactggtgtccgtcaaggttttagtattgcacct
cataaatcagatgctgctaatcaaactaatcaaaccaaacctcttcagtctcctcaacaa
tctatgaacaccaacaaaatgattttgacaagttctggacaacttgtgccacaaattcaa
caacaacaacagcagcagcaaacagtgcaagtacaacatttgcaacagcaacaacaagct
caacaacaaattaaattagttagtatgcaatcgccaaaccatcaaattgtaagtatgcaa
tcgcctcaagttgcatatcaacaacagcaaatcatcaaacccaccacaaacgtaatgagt
atgtctatgaattctccacaaaagatacatatacatcaattgcagcaaggccaagctatt
gtcagtagtcagccacaacaacaaatcactattctggatcgtccagttataccagttgtt
tcatgtgctcctcaggcatcaacacaatctcagcttctaatttctccccaaattcaaaca
tcgacttcatcaatgcttcctccaattaaatctgatgaatctccaaagacatccccagct
gttcaaactaatgaaacatcagctgttgtggtctcaatagcagaaaatactactgaaaca
actgcatcagtttcgttacctgttacttctaatgaagacaattctagagataaaggattg
cctaaagctttagtaaaaccacaagtcttgacccatgttattgaaggctttgtgatacaa
gaagctgatcaaccattccccgtaaatcgatcttgcactatagcagatatttccaatagt
gctcaggacaaggaaagcataaaattagatgaagaaccgccaaataaaaagagtaaaaca
gacaataacaaccaagacaaaatcaagtgcgactcatgtggaaaatgtcaagaattacaa
aaattcaaaattaaaaagaaatcgaaacgtttttgttcacaagaatgctcaaagatattt
gaaaatagttcaaaaactggacaaaccgacaagaaaaatggaaaaaattgggaatgtgaa
agcaatggttcagctggtgattctagtaatactgcctcatcacttgatttacctaatcga
atgcaaattgatgttgaccctaagacagatgtggctccagaattgtgttctattaatcca
ttgacatggactgttaaagatgtacggaagtttattggccaactaacagatagtgaggaa
atagcagcagattttgaaagtcatgaaattgatggtcaggctttgatgctgctcaaagaa
gatcatttaattagagatatgtcaatgaaacttggaccagcattaaaaatatttgcaaaa
ctggatgccatgcgtactgaaaatccagaacttcaaccccctgcaacttcacaataa
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