Rhopalosiphum maidis (corn leaf aphid): 113555259
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Entry
113555259 CDS
T06065
Name
(RefSeq) LOW QUALITY PROTEIN: intraflagellar transport protein 122 homolog
KO
K19656
intraflagellar transport protein 122
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rmd03037
]
113555259
Cilium and associated proteins [BR:
rmd03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
113555259
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_IFT122_2nd
Beta-prop_IFT122_1st
Beta-prop_EML_2
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
ANAPC4_WD40
Zn_ribbon_IFT122
Zn_ribbon_IFT122_C
EIF3I
Beta-prop_WDR19_1st
NBCH_WD40
TPR_IFT80_172
Beta-prop_CAF1B_HIR1
Beta-prop_Vps41
WDR55
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
TPR_IF140-IFT172
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
TPR_GEMI5
TPR_COPA_B
Beta-prop_IFT80_2nd
V-cyclin_C
Motif
Other DBs
NCBI-GeneID:
113555259
NCBI-ProteinID:
XP_026815465
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Position
2:complement(46304600..46313624)
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AA seq
1179 aa
AA seq
DB search
MHCIPIWLHKIQDKDKIQQCIYSICFSVDGSQLLVTAGHDVLIYRSIDGHLLHTLKGHKE
NIICLTNAKNGKLFASGSADKTVILWSSKFEPVGKYNHNDTVQCMDFNSITHHLASCSSM
EFGLYSLEQKSVQKYKILFKINTCAWSTDGQSLALGYDNGCISLRNRSGEEVANIELSDG
QSVWAITWLSSRYNEDEILCIADWGQKLSFYNKNGSEILKNKNIHLEALTIKTMCNDSYL
LIGGCKGKCGIFSFEGIKLSEFEDKHSWIWASSVHPRSKFLALGCQDGTLAYYKIEFSVI
HGLYQEKYAYRENMTDVVVQDLVXNKKVRIKCRDLVKKIAIYKDRLAVQLPSKVVVYESV
NQTSEMHYRIKEKMAENAICNLLVVCSNNLVLCQETRLQCLSLAGIYEREWTMNSVVKYL
KVIGGSPGKEQILVGLHNGQVLMLHVNSLVVQQLFNVTKSVRCFDVNISMDKAAIVDDEN
KCSFFDMKSKKLLFQESDITSVVWNSKFSDMACFSGKHIFNIKVNEFPAHQQRIIGHVIG
MWGSRIFSLNDSIVSVIEVALSVPLYQCLEKKYFNKAYQIACLNVTDTDWKILAREALEN
FELSIAKKAFANIKEFKYLELIALYEEKGSHNDKDKHCLLADVLAYEGKFKEAARIYQVW
GFEHKAFTMFTDLKMFDLAQEFIGSNTAGENKELLIKRAEWAMSIDEHKVAAELYISAEE
FDRAIDIMVHNCWTHMLLELGRHSDKAEEVVLSRIGDELRKLGDTESAVEIYSKLGKDMG
PDMVSLHVEAHNWDQAFALVEKNPMFAPLVYLPYAEWLAENDKFVEAQKAFLKGGRPERA
FQVLQMLTENAVDEQRFQDAGHYYWLLSRQYLNIASNSNDNSDKMINQYNLYDKYASIYY
AYNAIHRYMEDPFMSYQPETLFNISRFLINETKNIHLKGVSKFAILYSFSKQALTMRAFK
LARQILTKLQQLRIPPEYQDYVDLASLSIRAKPFHDNEDLLSMCYRCLTYNSPVVQTCIT
CNHKFIFSYIKFEILPLIEFQLEDNISDNEALKLIQNSYDEHKPKESEEKPYNVDKFILD
EENQDHLVDPFTYKLMNFENKEKTYQPIKVNKTILQSMSTTSIIVCKWPKPLKFKYYRNV
LPGFSVTNCQNCFKMFHSDEYEVEILRLGHCPFCRTKTG
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgcattgtattcccatttggcttcataaaatacaagataaagataaaattcaacaatgt
atttacagtatttgcttcagtgttgatggttcccaattacttgtaacagcaggtcatgat
gttcttatttaccgatccattgatggacatcttctacatactttaaaaggacacaaagaa
aacattatttgtttaacaaatgctaaaaatggtaaactatttgcttcaggctcggcagat
aaaacagttattctctggtcatctaaatttgaaccagtgggaaaatacaaccacaatgac
acagtccagtgtatggattttaattcaattactcatcacttagcgagttgcagttctatg
gaatttggtttatattccttagaacaaaaatcagttcaaaaatataaaatcttgtttaaa
ataaatacatgtgcctggtcaacagatggtcaatcattagcacttggatatgataatgga
tgtatttccttacgtaatcgaagtggagaagaagttgcaaatattgagctatctgatgga
caatcggtttgggcaattacatggttatcatctagatataatgaagatgaaattttatgc
attgctgattggggacaaaaattatcattttataataaaaatggttctgaaattttaaag
aataaaaatatacacttagaagctttaacaattaaaaccatgtgtaatgattcctattta
ttaattggtggttgtaaaggaaaatgtggtatattttcttttgaaggaataaagctgagt
gaatttgaagataaacacagttggatttgggcatcttctgtgcatccacgttcaaaattt
cttgcgttaggttgtcaagatggaacattagcttattacaaaatcgagttcagtgtaata
catggactttatcaagaaaaatatgcatacagagaaaacatgacagatgttgttgttcaa
gatttagtanctaacaaaaaagtacgaataaaatgcagagatttggttaaaaaaattgca
atttataaagatcgattggctgttcaattaccatctaaagttgtagtatatgaatctgta
aatcaaacatctgaaatgcattacaggatcaaagaaaaaatggctgaaaatgctatttgt
aatctactagtagtttgttcaaataatttagttttgtgtcaagaaacaagacttcaatgt
ttatcactagctggtatatacgaacgtgaatggaccatgaattctgttgtgaaatattta
aaagttattggaggttctccaggcaaagaacaaattttagttggattacataatggacaa
gttttaatgttacatgttaatagtttagtagtacagcaattatttaatgttactaaaagc
gttcgttgttttgatgtgaatatatcaatggacaaagcggctattgttgatgatgaaaac
aagtgttcattttttgatatgaaatcaaaaaagcttctttttcaagagtctgatattaca
agtgtggtttggaattcaaaattttctgatatggcatgtttttcgggtaaacatatattt
aacatcaaagttaatgaatttccagctcatcaacaacgtattataggacatgtaataggc
atgtggggttctagaatattttctctaaatgattctatagtatctgttattgaagtggca
ttatcagttccattatatcaatgtttagagaaaaaatattttaacaaagcatatcaaatt
gcctgtcttaatgtcactgatactgattggaaaatattagctcgagaagccttagaaaat
tttgaactctcaattgccaagaaagcttttgctaatataaaagaatttaagtacttggag
ctaatcgcactatatgaagaaaaaggatcacacaatgataaagataagcactgtctacta
gctgatgtacttgcctatgaagggaagtttaaagaagctgctagaatttatcaagtatgg
ggttttgaacataaagctttcaccatgtttactgatttgaaaatgttcgatttagcacaa
gaatttattggatcaaatactgctggtgaaaataaagaactacttattaaacgtgcagaa
tgggcaatgagcattgatgaacataaagtagcagcagaactatatatttcagctgaagaa
tttgaccgtgctattgatattatggttcataactgttggacacatatgttattagaactt
ggacgtcattctgacaaagctgaagaagtagttctaagtagaattggtgatgaacttcgt
aaactaggtgatacagaaagtgctgttgaaatatattctaaattgggcaaggatatgggc
cctgacatggtatctttgcatgtagaagctcataattgggatcaagcttttgccctagtt
gaaaaaaatccaatgtttgctcctctagtatatttaccatatgctgaatggttggcagaa
aatgataaatttgttgaagcacaaaaggcttttcttaaaggtggtcgaccagaacgtgcc
tttcaagtattacagatgttaactgaaaatgctgttgatgaacaacgttttcaagatgct
ggtcattattattggttattaagtagacaatatttaaatattgcttcaaatagtaatgat
aactcggacaaaatgataaaccaatacaatttatatgacaagtatgcttcaatatattat
gcgtacaatgctattcaccgttatatggaggatccttttatgtcatatcaaccagaaact
ttattcaatatatcacggtttcttataaatgaaacaaaaaatatacatctaaaaggtgtt
tcaaaatttgcaatattatattcattttcaaaacaagctcttaccatgagagcatttaaa
ttagcaagacaaattttgacaaaattacaacagctgaggattcctcctgaatatcaagac
tatgtagatctagcttcactgagtattcgtgcaaaaccatttcatgacaatgaagatctt
ttatcaatgtgttatcgttgcttgacttataattctccagttgttcaaacttgtatcaca
tgcaaccataagtttatattttcatacataaaatttgaaattttaccattaattgaattc
caattggaagataatatatcagacaatgaagcattaaaactaatacaaaattcttatgat
gaacataaaccaaaagaatctgaagaaaaaccttataatgtagataagtttattttagat
gaagaaaatcaagatcatttagttgatccattcacatacaaacttatgaattttgagaat
aaagaaaaaacttatcaacccataaaagttaacaaaactattttacaatcaatgagcact
actagtattatagtttgtaaatggccaaaaccgttaaaatttaaatattacagaaacgtg
ttaccaggattttctgtgacaaactgtcaaaattgttttaagatgtttcattcagatgaa
tatgaagttgaaatcttaaggttaggtcattgtccgttttgcagaacaaagacaggatag
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