Rhopalosiphum maidis (corn leaf aphid): 113557999
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Entry
113557999 CDS
T06065
Name
(RefSeq) short transient receptor potential channel 6-like
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rmd04040
]
113557999
Ion channels [BR:
rmd04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
113557999
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GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_3
Ank
Ank_2
PKD_channel
Motif
Other DBs
NCBI-GeneID:
113557999
NCBI-ProteinID:
XP_026819333
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Position
3:49263524..49269889
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AA seq
736 aa
AA seq
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MSEQLYSFTDELTPQDQQFFELVKSCNLPEIEKHLKTNSVNINMKFQGDTPLNLAIQNQC
EPLVDLILQQKDVKIGDSMLLAITYDNLKLLDRLLEFQEANGRGKSRGNAGGRKRIASDT
NGSDAADGDDDDNSDSEEFPRFMTPLLLATQCGLYETVEYLLNRGHTLDKPHPPRCTCDE
RCAAAAIRGEVVTDGCERLNAYWAISNPTFICTTSTSADPVLRCFQLHDELLQCGSEEQV
YKAAYTSMAEQLKQFAVDILVNCRTSDEVKIMLRNRDGCKFRGQFPYPRLITAMDHKQKK
FVAHTNIQQVLEMAWLGDWIEWKSYSVARKLAYLLWRFCMLPVMVILGMFAPDSKLNQAN
RLPINRMFNSLVAYLVFLVLLFVHSNADKLLARRGAPRFHTWFPIVVFVLGHVVEKLKLR
LQQGSERFFRNLWNVFDTVKLMLFTVSFMCWALTGALVGRVSENLDRKYWHWADPQLVAE
ALFAVATVMAYMRLLFLCQLNYDIGPMQVSLGKVLYDFAKFATFLVIIMAAFTCGLGTYY
AYYTGMVYKNPETGETARQEDSFVTVADTFKTLFWGIFCMTSLDAPNVVVGNTVAATGGV
DAATQSHQFTQLMGYGLFAVFEVLMVIVMMNMLIAAMSDTFQRVADNAEYEWLFGRTQVY
VSYMLQDDMPPPFNLLPTAGWLIGAKRFVSKSDGYAHLLSDGWRGDSRQSKQDATEFREL
MAEIIKRYFMYRTHVN
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagcagttgtattcgtttaccgacgagttgacgccgcaggatcaacagtttttt
gagttagtgaagagctgcaacttaccagaaatcgaaaagcatttaaaaactaatagcgta
aatatcaatatgaagtttcagggagacacaccgttgaatctggccatacagaaccaatgc
gaaccactagtagatttgattcttcaacaaaaagacgtgaaaatcggcgattcgatgctg
ttggcgatcacgtacgacaacctaaagctgctggaccgtctgctggaattccaggaggcc
aacggcagaggcaaaagccggggcaatgcgggcggccggaaaagaatagcgtcggacacc
aacggaagcgatgcggcggacggcgacgacgacgacaacagcgattcggaagaattcccg
cggttcatgacgccactgctattggccacgcaatgcggcttgtacgagacggtcgagtac
ttgctgaaccgcggccacacgctggacaagccgcacccgccgcgatgcacgtgcgacgag
cggtgcgcggctgcggccatccgcggcgaggtggtcaccgacggctgcgagcggttgaac
gcgtactgggccatcagcaacccgacgttcatatgcaccacgtccaccagcgccgacccg
gtgctcaggtgtttccagttgcacgacgaactgttgcagtgcgggtccgaggaacaggtg
tacaaggccgcgtacacgtccatggccgaacagctaaaacagtttgcggtggatatatta
gtaaactgtaggacatcggacgaagtaaaaatcatgttgcgaaatcgggatggatgcaag
ttcagaggacagtttccgtacccgagactgatcacagccatggaccacaaacaaaaaaag
ttcgtggcgcacaccaacatccaacaggtgttggagatggcgtggctgggcgattggatc
gagtggaagtcgtattcggtggcacggaaattggcatacttgctatggcggttctgcatg
ctgccggttatggtgattctgggaatgtttgcgcccgactcgaaactaaaccaggccaac
cggttgccgatcaaccggatgtttaatagtctggtcgcatacctagtgtttttggttctg
cttttcgtccactcgaacgccgacaagttattggcgcggaggggtgcgcctaggttccac
acgtggttcccaatcgtcgtatttgtgctcggccacgtggtcgagaagttgaagctgcgg
cttcagcagggttcggagcgttttttcaggaacctgtggaacgtgttcgacacggtcaag
cttatgctgtttacggtgtcgttcatgtgctgggcgctgactggcgccctggtcggccga
gtgtccgaaaacctggaccgcaagtactggcactgggccgacccacagctggtggctgag
gctttgttcgccgtggccacagtcatggcgtacatgcgactattgttcttgtgccagcta
aactatgacatcgggcccatgcaggtgtccttgggcaaagtgctgtacgacttcgccaag
ttcgccacgttcctggtcatcattatggcggcgttcacgtgcggcctgggcacgtactac
gcctactacacgggcatggtatataagaacccggaaacgggtgagacagcccggcaagag
gactcgttcgtcaccgtcgctgacacgttcaagacgttgttctggggcatattctgtatg
acgtcgctggacgcgcctaacgtggtggtcggaaacacggtggcggccaccggcggcgtc
gacgcggccacgcagtcgcaccaattcactcagctgatgggttacggtttgttcgccgtt
ttcgaggtgctcatggttatcgtcatgatgaacatgctgatagccgccatgtcggacacg
ttccagcgggtggccgacaacgccgagtacgagtggctgttcggccggacccaggtgtac
gttagttacatgttgcaggatgacatgccgccaccattcaacctgttgcccaccgccggc
tggctaatcggtgccaagcggttcgtatccaagtccgatggctatgcccacttgttgagc
gacgggtggagaggtgacagccgccaatcaaaacaagacgctaccgagtttcgggaactc
atggccgaaatcatcaagcggtatttcatgtacagaacacacgtcaactga
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