KEGG   Rhodothermus marinus SG0.5JP17-172: Rhom172_1793
Entry
Rhom172_1793      CDS       T01606                                 
Name
(GenBank) endonuclease III
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
rmg  Rhodothermus marinus SG0.5JP17-172
Pathway
rmg03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rmg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Rhom172_1793
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rmg03400]
    Rhom172_1793
Enzymes [BR:rmg01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Rhom172_1793
DNA repair and recombination proteins [BR:rmg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Rhom172_1793
 Prokaryotic type
     Rhom172_1793
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S HHH_5 RecR_HhH Zn_ribbon_8 Zn_ribbon_Dof DUF2400 Zn_ribbon_19 HypA Zn_ribbon_3 Zn_ribbon_PaaD Phage_zn_bind_2 Zn_ribbon_IS1595
Other DBs
NCBI-ProteinID: AEN73707
LinkDB
Position
complement(2053076..2053918)
AA seq 280 aa
MARTSRARQVLARLRQVIARPQTELHHENPYQLLVAVMLSAQCTDARVNQVTPALFAAFP
TVEALAAAEPEDVLPYIRSVSYPNSKARHLVAAARRIRDAFGGEIPDSLEALESLPGVGP
KTARVVASVAFGVAALPVDTHVYRVAHRIGLVRRARTPLEVERRLKRQLPARDWGEAHHL
LILHGRYTCTARQPHCDRCVLTDLCDHYRRLRRLPAPLEGLDPHQGRYFCKRCRRYFDVP
VYRTDRYGLEQVSCPACGSMHVFDAKTGRSTKRVPDYRVR
NT seq 843 nt   +upstreamnt  +downstreamnt
gtggcacgtacgtcccgggcccggcaggtgctggcgcggttgcggcaggtaatcgcgcgg
ccgcagaccgagctgcaccacgagaatccctaccagctactggtggccgtgatgctctcg
gcccagtgcaccgacgcgcgggtcaaccaggtgacgccggcgctgtttgccgcttttccg
accgtcgaggcgctggcggccgccgagccggaggacgtgctgccctacattcggtccgtt
tcgtacccgaacagcaaggcgcggcatctggtcgccgcagcccgacgcatccgcgacgca
ttcggcggcgagattcctgactcgctcgaagcgctcgagtcgctcccgggcgtcggtccc
aaaacggcccgcgtggtggcctcggtcgcctttggggtggccgccctgcccgtcgatacg
cacgtctaccgcgtggcgcatcggatcgggctggtgcggcgggcccgcactcccctcgag
gtcgaacgccggctcaagcgccagcttccggcgcgcgactggggcgaggcccaccacctt
ttgatcctgcacggacgctacacctgcacggcccgtcagcctcactgtgaccgatgcgtg
ctcaccgacctgtgcgatcactatcggcggcttcgtcgactgcccgcgccgctcgaaggg
ctggatccgcatcagggacggtacttctgcaagcgatgccggcgctatttcgacgtaccc
gtgtatcggaccgaccgctacgggctggagcaggtaagctgtcccgcgtgcggttcgatg
catgtatttgatgcaaaaaccggtcgttcgacgaaacgcgtaccggactatcgcgtgcgc
taa

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