Rhodothermus marinus SG0.5JP17-172: Rhom172_2237
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Entry
Rhom172_2237 CDS
T01606
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
rmg
Rhodothermus marinus SG0.5JP17-172
Pathway
rmg01501
beta-Lactam resistance
rmg01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
rmg00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Rhom172_2237
01503 Cationic antimicrobial peptide (CAMP) resistance
Rhom172_2237
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rmg03036
]
Rhom172_2237
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rmg02000
]
Rhom172_2237
01504 Antimicrobial resistance genes [BR:
rmg01504
]
Rhom172_2237
Chromosome and associated proteins [BR:
rmg03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Rhom172_2237
Transporters [BR:
rmg02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Rhom172_2237
Antimicrobial resistance genes [BR:
rmg01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Rhom172_2237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND_2
YknX_C
BSH_CzcB
Biotin_lipoyl
CzcB_C
BSH_CusB
BSH_YhbJ
BSH_YknX
Beta-barrel_RND
BSH_Fcp1
RND-MFP_C
UBA_HOIP
Motif
Other DBs
NCBI-ProteinID:
AEN74135
LinkDB
All DBs
Position
complement(2554880..2556130)
Genome browser
AA seq
416 aa
AA seq
DB search
MAVRHRVRSWHVAALMLVLAVGGLLLYAFWPVLTGREEATRPEDVQASAPPVAVEAVVVQ
PVDFPLRAEATGTLAPWRQTEISAEISGRVVERRVEEGDRVAAGQVLVVLDDEEARLALA
EAEAALLKARSEYAVQLSQSGTAGIDSTRLAEARRAWQAAQEAYARGEIDEAALDAARQR
YEALLLLSGAQREAVRRVVTGLAEAEQRVARARLQLNRTRIRAPFAGRVADLQVEVGQHV
GPGQVLMRLLDDRRMKVKVDVLEADLVHIRPSAAAWVRLPALGDTVVAGVVHTVNPRIDP
KTGAGRVTVAVPNPEGRLLAGMFAYVALETRTLPDRLVVPAEAVLVRQGRDLVFVIRNGR
AQWTYVTTGPRSGDHVVLLDGVAPGDTVAVGGHHALAHDAPVEVTAVRPAFLIRDR
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcgacaccgcgtccgaagctggcacgtggcggcgctgatgctcgtgctggcc
gtcggaggcctgctgctctacgccttctggccggtgctgaccggccgtgaggaggccacg
cgtcccgaggacgtgcaggcctcggcgccgccggtggccgtcgaggccgtggtggtgcag
ccggtggacttcccactgcgggctgaggcgacgggtacgctggccccctggcgccagacc
gaaatcagcgccgagatcagcgggcgcgtcgtggaacgccgcgtggaagaaggggaccgg
gtggcggccgggcaggtgctcgtggtgctcgacgatgaggaggcgcggctggcgctggcc
gaggccgaggcggccctgctcaaggcgcgcagcgagtatgccgtccagctcagtcagagc
gggacggccgggatcgactcgacgcggctggccgaagcgcggcgggcttggcaggccgcg
caggaagcctatgcgcgcggagaaatcgacgaggcggcactggatgcggcgcggcagcgc
tatgaggccttgctgctcctctccggcgcgcagcgggaagccgtgcgccgcgtggtgacc
gggctggccgaagccgaacagcgcgtggcgcgggcccggttgcaactgaaccgcacgcgc
atccgggccccgtttgccggacgcgtggccgacctgcaggtggaggtcgggcagcatgtg
ggacccggtcaggtgctaatgcgacttctggacgaccgccgcatgaaggtgaaagtcgat
gtgctggaggccgatctggtgcatatccggccgagcgccgcggcctgggtgcggctgccg
gcgctcggcgatacggtggtggcgggcgtcgtgcacacggtcaacccccggatcgatccg
aaaacgggcgccggacgcgtgaccgtggccgtgccgaatccggaaggacgcctgctggcc
ggcatgttcgcctacgtggcgctggagacgcgcacgctgcccgatcgactggtcgtgccg
gccgaagccgtactcgtgcgtcaggggcgcgatctggtcttcgtgatccgcaacgggcgg
gcgcagtggacctacgtgacgaccgggccgcgctcgggcgatcacgtggtgttgctcgac
ggcgtggcgccgggcgacacggtggccgtcggcggccatcatgcgctggcgcatgatgcg
cccgtcgaggtgacggccgtccgcccggcctttctgatcagggaccgatag
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