Rhodothermus marinus SG0.5JP17-172: Rhom172_2720
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Entry
Rhom172_2720 CDS
T01606
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
rmg
Rhodothermus marinus SG0.5JP17-172
Pathway
rmg00300
Lysine biosynthesis
rmg00550
Peptidoglycan biosynthesis
rmg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rmg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Rhom172_2720
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Rhom172_2720
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rmg01011
]
Rhom172_2720
Enzymes [BR:
rmg01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
Rhom172_2720
Peptidoglycan biosynthesis and degradation proteins [BR:
rmg01011
]
Precursor biosynthesis
Amino acid ligase
Rhom172_2720
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
AEN74606
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Position
complement(3104412..3105914)
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AA seq
500 aa
AA seq
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MTRVLQRLERERLLQTVVGSATARKLTHLTDDSREVQPRGLFVAVRGERVDGHRFIEQAI
ERGAAAVVGEVMPEAFAERFPKVTFVQVSNSRRALGILATIFHMNPGRRLRLIGITGTNG
KTTTAFLVYHMLNAIGQETGLIGTVCYLFGRHELPASNTTPGPIELNHLLRRMTGVPCKN
CVMEVSSHALEQERVAGLSFSIAVFTNLTRDHLDYHGSFEAYLKAKKKLFDGLTFRATAL
YNIDDPSGPAMVADTQACCISYGQREDAQLRMRIVGHSLEGLTLNIDGRFQRFPLVGRFN
AYNLLAAYGVGRAMGLDPDLLLEALGRVPQIPGRFERFTFEDGTTAIVDYAHTPDALENV
LRTIREVMPEGARLWCVFGCGGERDRGKRPMMGAVAERLADCVIVTSDNPRSEDPLQIFE
DIRQGMRHPEAALWEVDRARAIEQAAKLCRPGDVVLVAGKGHEAYQIIGTEKIPLDDRQL
VQEYFEHYHTPARPPSIRFL
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
ttgacccgggtgctccagcggctggagcgtgagaggctgttgcagacggtcgtcggatcg
gcgaccgcgcggaagctcacgcacctgacggacgacagccgggaggtgcagccgcgcggg
ctgtttgtcgccgtgcggggcgagcgcgtcgatggccatcggttcatcgagcaggccatc
gaacggggcgccgcggccgtggtgggtgaagtcatgccggaggcgttcgccgaacgcttt
cccaaagtcaccttcgtgcaggtgtccaacagccggcgggcgctcggcatactggccacg
atctttcacatgaatccgggccggcggctgcgtctgatcggcatcacgggcaccaacggc
aaaacgacgaccgctttcctggtctatcacatgctgaacgccatcggccaggaaaccggt
ctgatcgggacggtctgctacctgttcggccgacacgagcttccggcgtcgaataccacc
ccggggcccatcgagctgaaccacctgctgcgacgcatgacgggcgttccctgcaagaat
tgcgtcatggaggtctcctcgcatgcgctggagcaggagcgggtggccggcctgtcgttc
tccatcgcggtctttacgaacctgacgcgcgaccacctggattatcacggttcgttcgag
gcctatctgaaagccaaaaagaagctctttgacgggctgacgtttcgggccacggcgctt
tacaacatcgacgatcccagcggtcccgccatggtggccgacacccaggcctgctgcatc
agctacggccagcgggaagatgcccagttgcgcatgcgcattgtcggccacagcctggaa
ggcctgacgctcaacatcgacgggcgctttcagcgctttccgctggtgggccgcttcaac
gcctacaacctgctggccgcttacggggtggggcgggccatgggactggatcccgacctg
ctgctggaggcgctggggcgcgtgccgcagattcccggccgcttcgaacgcttcacgttc
gaagacggcaccacggctatcgttgactatgcgcacacgcccgatgcgctcgaaaacgtg
ctgcggacgatccgcgaggtgatgcccgaaggggcgcgtctgtggtgcgtcttcggatgc
ggaggcgagcgcgatcggggcaagcggcccatgatgggcgccgtggccgagcgcctggcc
gactgcgtaatcgttaccagcgacaacccgcgctccgaagatccgctccagatttttgaa
gacattcgccagggcatgcggcaccccgaagcggcgctgtgggaggtggaccgggcccgg
gccatcgagcaggccgcgaagctatgccgcccgggcgatgtggtgctggtggccggtaaa
gggcacgaggcctatcagatcatcggcaccgaaaagattccactggacgatcgtcagctg
gtgcaggaatacttcgaacactaccacacgccggcgcgtccgccttcaatccggtttctg
taa
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