Roseovarius mucosus: ROSMUCSMR3_03171
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Entry
ROSMUCSMR3_03171 CDS
T04779
Symbol
patB
Name
(GenBank) cystathionine beta-lyase PatB
KO
K14155
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
rmm
Roseovarius mucosus
Pathway
rmm00270
Cysteine and methionine metabolism
rmm00450
Selenocompound metabolism
rmm01100
Metabolic pathways
rmm01110
Biosynthesis of secondary metabolites
rmm01230
Biosynthesis of amino acids
Module
rmm_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
rmm00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
ROSMUCSMR3_03171 (patB)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
ROSMUCSMR3_03171 (patB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rmm01007
]
ROSMUCSMR3_03171 (patB)
Enzymes [BR:
rmm01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
ROSMUCSMR3_03171 (patB)
Amino acid related enzymes [BR:
rmm01007
]
Aminotransferase (transaminase)
Class II
ROSMUCSMR3_03171 (patB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
DUF3330
Motif
Other DBs
NCBI-ProteinID:
ARE84634
UniProt:
A0A1V0RS86
LinkDB
All DBs
Position
complement(3285229..3286398)
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AA seq
389 aa
AA seq
DB search
MNFDEIIDRRGTHSDKWDMMQAKYGVSPEDGIPMWVADMDFRPPACVTEALIGMTQHGVY
GYYGDDAAYRAAIQWWMKTRHGWTVEADAIFTTHGLVNGTSMCIDTWTAPGDAVVVFTPV
YHAFARVIRAAGREVRECPLVNTSGRYEMDFDAYDALMTGNEKMLILCSPHNPGGRVWTK
AELEGVADFARRHDLILVSDEIHHDLVMPGQRHTAMPHIEGIADRLVMMTATTKTFNIAG
AHLGNVIVPDAKLRAQFAARMGAMGISPNSFGLFMAEAAYSPEGAEWVDALCLYLDGNRQ
LFEAGMQAIPGVRAMPLEATYLTWIDFAGTGMPAADYTARVERDAHVVANHGPTFGTGGE
SFLRFNIATPRARVAEAVARIQTAFADLQ
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcgacgagatcatcgaccgccgcggcacccattccgacaaatgggacatgatg
caggccaaatatggcgtctcgcccgaggatgggattccgatgtgggtggcggatatggat
ttccgcccgcccgcctgtgtcacagaggcgctgatcggcatgacgcagcatggcgtctac
ggctactatggcgacgatgccgcctaccgcgccgcgatccagtggtggatgaagacacgc
cacggctggacggtcgaggcggatgcgatctttaccacccatggcctggtgaatggcacc
tcgatgtgcatcgacacatggaccgcgccgggggatgcggtggtggtcttcacccccgtc
taccacgcctttgcccgtgtgatccgtgctgcggggcgcgaggtgcgcgaatgtcccctc
gtcaacacctcaggccgctacgagatggatttcgacgcctatgatgcgctgatgacgggc
aatgaaaaaatgctcatcctctgctcgccgcataatcccggtggccgggtctggaccaag
gcagagcttgagggcgtggccgatttcgcccgccgccatgacctcatcctcgtgtcggat
gaaattcaccatgatcttgtgatgcccggccagcgccataccgccatgccccatatcgag
ggtatcgctgatcggctggtgatgatgaccgccaccaccaagaccttcaacattgcaggc
gcgcatctgggcaatgtgatcgtgcccgatgcaaagctgcgcgcgcagtttgccgcccgc
atgggcgcgatggggatatcgcccaattcctttggtctcttcatggccgaggccgcctat
agccccgagggcgcagaatgggttgatgcgctctgcctctatctcgatggcaaccggcaa
ctctttgaggctggaatgcaggccattccgggcgtgcgcgccatgccgctcgaggcgacc
tatctgacgtggatcgactttgccggcaccggcatgccagcggcggactataccgcacgg
gtcgagagggatgcgcacgtcgtggccaaccacggcccgacctttggcaccggcggcgag
agcttccttcggttcaacatcgccacaccgcgcgcccgcgtcgcagaggcggtcgcgcgc
attcagaccgcctttgccgatctgcaatga
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