Rhipicephalus microplus (southern cattle tick): 119174512
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Entry
119174512 CDS
T07403
Name
(RefSeq) LOW QUALITY PROTEIN: telomerase-binding protein EST1A-like
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119174512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmp03019
]
119174512
03032 DNA replication proteins [BR:
rmp03032
]
119174512
Messenger RNA biogenesis [BR:
rmp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
119174512
mRNA cycle factors
Common to processing body (P body) and stress granule
119174512
DNA replication proteins [BR:
rmp03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
119174512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
PIN_4
EST1
Motif
Other DBs
NCBI-GeneID:
119174512
NCBI-ProteinID:
XP_037281351
LinkDB
All DBs
Position
1:complement(157516492..157617632)
Genome browser
AA seq
1535 aa
AA seq
DB search
MADRPSRMHRNVQKASHVERTSASKRQAMEYNRADLAGETDGKRESRRSKPEMAIYRPGM
GLLQKKSDQSGTPDAKGQNLVPGLKDLSLRDGVNGKWSGNRAKRPDQPVYTPRLVKPSED
RPTALHEGRPKAVVVDSKGPEFSTKPFPIAGTKPASEKKAEISVQKLQQHPRPESALQNG
HQGHRVENKVTENGAEHPKETAKAIEVIGPPAAKQQVVVGKRYSPVGNTAAPKHMNQRSE
RNFARYSRRGNGRRSGPFPDTRVEENWDISDSPGTLDKPQQGVSAQIPGQPVQTTSSHRR
NSFSEGPRHSGSDDVDEAEHGSRRRGMKKKIKKRRNKTREDQLVVNTAVNGLPENSHHSD
GNATAEEDWSGELIVESSVHPRIYSQEQVSQNDGPKKRERNNSYQSSSPEPCRFSGLKFT
NRHRRESRSEEEKDKGPTLSRNGLVPAPIIKDWSAAVVEEEKRQRHSLAKTVDNLRNNSS
ETSTYRSNVIEVHRKNCKNDSSSQKASPPKTHESQLPPRFQKRNRPATPENTVSSAAKGG
IIRLPSDVSLNGSGPAEHQCDERSVVAATLCGMGQEKPLIAVKPQPHVPVDSIYSRTMPM
TLQPVFAHHFEPAPPSVMSPPMVPAAYPAVPGVQFSCHHPNQGLPTVYHGDQVIAPEMYG
QRQIKPLVQKNLHDAALLERELMNHLSKGIQNMDTKAMGHCRWKLQLRYENVILADPRFC
AEKNVENALWKSAFYQGIEAFRRIMEECPDFQEEAKMLLLSLVDEGTIFYENLLDKFQET
YGFSLSQFLEPDVCGSLGAGSSTSSAGGVAGGRVIPDSVRLVLISVQKIYICLGDLARYR
EQAMGTTNYGKARSWYLKAQQIAPKNGRPYNQLAILALYARRKLDAVYYYMRSLAASNPF
LTARESLLALFDDARKKYDHLERKRLEEEGVNQQPSLESPLEEERLEIWIRPDGTTSHRS
SRQGTKRRAKVEQLSLLSTIDLNKRYVLSFLHVHGKLFTKVGMETFSETARRMLMEFRCL
LQRTPAAVTNSRHLQLLAINMFTVANTCLKDRNMEPDCRSLLQEQSLQVALAHVAIVLER
AMQLLQQSVPSPSSSTSSSPGSSSPPRLSLSDELAELLPTLKLWTDWMSCQKRLWIPPPT
PCDYNTSVKGSVWTMLADLLTVLRKLNFGDVKFFKEPAEDRELVTLPEDTTLASFVPLLG
APQEAFYVQMPCDRERARNCLRINRIQFFGDYLCGISPPYLEFNVERKRFVSLISVSDTE
SDSEKELTYDSGYGEVENTGSTSACLTRLQSEEELELGDSLDDQDAPLKSEEEENEIQKL
RTKKEELRKAKEQHDRQQSCVHAFLQEHRSKQAAMLEIRPRFLIPDTNCFIDHLPLVQKL
VADGHFNVYVPIVVLNELHGLARGGSRGPGPFPDHCEKVGSSARAALAYLEERFGQREPK
LRAITIRGSILDTISFRSEDVGDYKGTNDDQILTCCRLLCNDRTEHALPREPDRPVKLYR
ETVLITEDRNLCVKALTHNVPVRDLPAFLRWANIS
NT seq
4608 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccgaccgtccagaatgcatcgaaacgttcaaaaggcatcacacgttgagcgg
acgagtgcttccaagcgacaagcgatggagtataatcgtgcagatcttgctggtgaaacg
gatggcaaaagagaaagcaggaggtccaagcccgagatggctatctacaggccaggcatg
ggcttgcttcaaaagaaatctgaccaatccggaacacctgatgccaaagggcagaacctt
gtgccaggcttgaaggacctgtctctaagagatggcgtcaatgggaagtggtcgggcaat
cgtgccaagcgacctgaccagcccgtctacacaccgcgactagtgaagccttcagaggac
cggcccactgctctgcatgaagggcgacccaaggcagttgtggtggactctaaggggcca
gaattttctacaaaaccttttcccatagcgggaacaaagcctgcctctgaaaagaaagca
gagatcagtgtacagaagctgcaacagcatcctcgccctgaatcggctcttcagaatggc
caccaaggacatcgagtggagaataaagtgacggagaatggtgcagagcatcccaaagag
accgcaaaagccatcgaagtcatcgggccaccagcagcgaagcagcaagttgtcgtgggt
aagcgttatagtcctgtgggcaacacagcagctccaaagcacatgaatcaaaggtccgag
cggaactttgcaagatatagtcgacggggcaatggcaggagaagtggcccgtttcccgac
actcgtgttgaagagaactgggacatcagcgacagcccaggaactcttgataagcctcag
caaggagtttccgcccagatacctggccagcctgttcagactacgtcctctcatcgcagg
aacagcttttctgaagggccccgacacagtggttctgacgatgttgatgaggccgagcat
ggctcccgtcgccgagggatgaagaaaaaaattaagaagaggcgaaacaagacaagagaa
gaccagctagtcgtaaacacggctgtcaatgggttgccggaaaacagtcatcactcggat
ggcaatgcaacagcagaggaagactggagtggggaactcatcgtggagtcgtctgtgcac
ccaaggatctacagtcaggagcaggtgtcgcaaaatgatgggcccaagaaacgcgagaga
aacaacagctaccagagctcgtctcctgagccctgtcgcttcagtgggctcaagttcacc
aacaggcatcgccgtgagtcacgttccgaagaggagaaagacaagggcccgactctaagc
cgaaatggacttgttccggcccccatcataaaggactggagtgcagctgtagtggaggaa
gaaaagcgccagaggcactcacttgccaagactgtagacaaccttagaaacaattctagc
gaaacgtccacctaccgttccaatgttatagaagttcatcgtaagaactgtaaaaatgat
tcctcgtcccaaaaggcctcccctccgaagacacacgagtcccagctgcctccccgcttc
cagaagcgtaaccggcctgcgacccccgaaaacacagtctcgtcggcagccaaaggtggg
atcattcgacttccgtcggacgtcagcctaaacggctccggccctgcagaacaccagtgc
gatgagaggagcgtggtggcggcaaccttgtgcggtatgggccaggaaaagcccctaatc
gcagtgaagccacagcctcacgtgccagtagattctatctacagcaggacaatgccgatg
acactgcagcccgttttcgcccaccacttcgaaccagccccgccctctgttatgtcgccg
ccaatggtgccagcagcatatccggcagtgcctggtgtgcagttttcgtgccatcacccc
aaccaaggtttgcctactgtctaccatggtgaccaagtcatcgcgccggagatgtatggt
caacgccaaataaagccactcgtccagaagaacctgcacgatgctgcccttctggagcga
gagctgatgaatcacctttctaagggcattcagaacatggacaccaaagccatgggccat
tgcagatggaagcttcagcttcggtatgagaacgtgatcctggctgacccaaggttctgt
gcggagaagaatgtggagaatgcactctggaagtcagctttctaccaaggcatcgaggca
ttccgtcgcatcatggaagagtgtcccgactttcaagaggaagcgaagatgctacttctc
agcttggttgatgagggcaccatcttctacgagaaccttttggacaagttccaggagacg
tacggcttcagcttgagccagtttctcgagcccgacgtctgtggttccctcggtgctggt
tcctccacttcgtcggcgggcggcgttgccggaggcagggtcattccagactccgtccgg
ctggtgctcatctcagtgcagaaaatctacatctgcctaggggacttggctcggtaccgg
gagcaagccatgggtaccactaactatggcaaagctcgaagctggtacctgaaggcacag
cagatagcacccaagaatggccgtccatacaatcagcttgccattcttgcactctatgcg
aggcgaaagctcgatgcagtatactattacatgcgaagcctagcagcgagcaatcctttc
ctgactgcgagggaaagccttctcgccctcttcgacgatgctaggaaaaagtacgaccac
ctagagcgtaagaggctggaggaggagggcgtcaaccagcagccaagtctggagagtccg
ttggaagaagagcggctggagatctggatcaggccagacgggaccacttctcaccgtagc
agccgacaggggaccaagcgtcgcgcgaaggtcgagcagctgtcgctgctttcgacaatt
gatctcaacaaacggtacgtcttaagcttcctgcacgtccacggcaagctcttcaccaag
gttggtatggaaacattctccgagacggctcgccggatgctgatggagtttcggtgccta
ctccaaagaactccggctgctgtcaccaatagccggcacctgcagctccttgcaatcaac
atgttcaccgtagcgaacacatgcttaaaagaccgcaacatggagccagactgccggtca
ctgctccaggagcagagcctgcaggtggcactcgcccatgtggccattgttttggaacgg
gccatgcagttgctgcagcagagcgtgccctccccttcatcctcgacctcatcctcacct
gggtcctcctccccgcctcgcctgtccctctcggacgagctcgccgagctgctgcccacc
ctgaaactgtggactgactggatgtcctgccagaagcggctctggattccccctcctaca
ccctgtgactacaacaccagtgtgaaaggcagtgtttggacaatgctagcagacctgctg
acagtcctgcgaaagttgaactttggtgacgtcaagtttttcaaggagcccgcagaagat
cgtgagctggtgacattacctgaagataccaccttggccagctttgttcccctgctggga
gctccccaggaagctttctatgtccagatgccgtgcgatcgggagcgagctcgcaactgc
ctccgaatcaaccgaatccagttctttggggactacctctgtggcatctcgccgccgtac
ctagagttcaatgtggaacgcaagcgctttgtctcactcatctctgtctccgacacggag
tctgactcagagaaggaactgacctacgattctggatatggggaagtggaaaacactggc
tcgacaagcgcgtgcctgacgcggttgcagtctgaagaagagctggagttgggcgattcg
ctggatgaccaggacgcacctctcaagtctgaggaggaggagaacgagatccaaaagttg
cggaccaagaaggaggagctgcggaaggcgaaggagcagcacgaccgccagcaatcctgc
gtccatgcgtttctgcaggagcatcggagcaagcaggcggccatgctcgagatccggccc
cggttcctcatcccggacaccaactgcttcatcgaccacctgccgctcgtccagaagctg
gtcgccgacggacacttcaacgtctacgtgcccatcgtcgtgctgaatgagctgcacggg
ctcgcacgaggggggtcccggggtccgggacccttccccgaccactgcgagaaagtgggc
tcaagcgccagagctgcactcgcctacctggaggagaggtttggccagcgtgaaccgaag
ctcagggcaatcaccatcaggggctccatactggacaccatcagcttccgcagcgaggat
gtgggtgactacaaggggaccaatgacgaccaaatcctgacctgctgccggctgctttgc
aatgatcgtacagagcatgcacttccaagggagcctgatagaccagtgaagctgtaccga
gaaacagtcctcatcaccgaggaccggaacctgtgcgtcaaagctctgacacacaacgtg
cccgtcagagatttgccagccttcctccgttgggccaacatttcgtga
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integrated database retrieval system
