Rhodothermus marinus DSM 4252: Rmar_2705
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Entry
Rmar_2705 CDS
T01119
Name
(GenBank) UDP-N-acetylmuramyl-tripeptide synthetase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
rmr
Rhodothermus marinus DSM 4252
Pathway
rmr00300
Lysine biosynthesis
rmr00550
Peptidoglycan biosynthesis
rmr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rmr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Rmar_2705
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Rmar_2705
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rmr01011
]
Rmar_2705
Enzymes [BR:
rmr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
Rmar_2705
Peptidoglycan biosynthesis and degradation proteins [BR:
rmr01011
]
Precursor biosynthesis
Amino acid ligase
Rmar_2705
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
GntR
Lipoprotein_9
Motif
Other DBs
NCBI-ProteinID:
ACY49576
UniProt:
D0MGL3
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Position
complement(3134569..3136104)
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AA seq
511 aa
AA seq
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MPVAIPKQPIPLTRVLQRLEREGLLQTVVGSATARKLTHLTDNSQEVQPRGLFVAVRGER
VDGHRFIEQAIERGAVAVVGEFVPEAFAERFPKASFVQVSNSRRALGILATIFHMNPARR
LRLIGITGTNGKTTTAFLVYHMLNAIGQETGLIGTVCYRFGRHELPASNTTPGPIELNHL
LRRMTGVPCKNCVMEVSSHALEQERVAGLSFSIAVFTNLTRDHLDYHGSFEAYLKAKKKL
FDGLTFRATALYNIDDPSGPAMVADTQACCISYGQREDAQIRMRIVGHSLEGLTLNIDGR
FQRFPLVGCFNAYNLLAAYGVGRAMGLDPDLLLEALGRVPQIPGRFERFTFEDGTTAIVD
YAHTPDALENVLRTIREVMPEGARLWCVFGCGGERDRGKRPMMGAVAERLADCVIVTSDN
PRSEDPLQIFEDIRQGMRHPEAALWEVDRARAIEQAAKLCRPGDVVLVAGKGHEAYQIIG
TEKIPLDDRQLVQEYFEHYHTPARPPSIRFL
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgccggtagctatcccgaaacaaccgatcccattgacccgggtgctccagcgactggag
cgtgaggggctgttgcagacggtcgtcggatcggcgaccgcgcggaagctcacgcacctg
acggacaacagtcaggaagtgcagccgcgcgggttgtttgtcgccgtgcggggcgagcgc
gtcgatggccaccggttcatcgagcaggccatcgaacggggtgccgtggccgtggtgggc
gaattcgtgccggaggcgttcgccgaacgctttccgaaagcctccttcgtacaggtgtcc
aacagccggcgggcgctcggcatcctggccacgatctttcacatgaatccggcccggcgg
ctgcgtctgatcggcattacgggcaccaacggcaaaacgacgaccgctttcctggtctac
cacatgctgaacgccatcggtcaggaaaccggcctgatcgggacggtctgctaccggttc
ggccggcacgagcttccggcgtcgaacaccaccccggggcccatcgagctgaaccacctg
ctgcggcgcatgacgggcgtcccctgcaagaactgtgtgatggaggtctcctcgcacgcg
ctggagcaggagcgggtggccggcctgtcgttctccatcgcggtctttacgaacctgacg
cgcgaccacctggactatcacggctcgttcgaggcctacctgaaagccaaaaagaagctc
tttgacgggctgacgtttcgggccacggcgctttacaacatcgacgatcccagcggcccc
gccatggtggccgacacgcaggcctgctgcatcagctatggccagcgggaagatgcccag
atacgcatgcgcattgtcggccacagcctggaaggcctgacgctcaacattgacggacgc
tttcagcgctttccgctggtgggctgcttcaacgcctacaacctgttggccgcttacggg
gtgggacgggccatgggactggatcccgacctgctgctggaggcgctggggcgcgtgccg
cagattcccggccgcttcgaacgcttcacgttcgaagacggcaccacggctatcgttgac
tatgcgcacacgcccgatgcgctcgaaaacgtgctgcgcacgatccgcgaggtgatgccc
gaaggagcgcgtctgtggtgcgtcttcggatgcggaggcgagcgcgatcggggcaagcgg
cccatgatgggcgccgtggccgagcgcctggccgactgcgtaatcgttaccagcgacaac
ccgcgctccgaagatccgctccagatttttgaagacattcgccagggcatgcggcacccc
gaagcggcgctgtgggaggtggaccgggcccgggccatcgaacaggccgcgaagctatgc
cgcccgggcgatgtggtgctggtggccggtaaagggcacgaggcctatcagatcatcggc
accgaaaagattccactggacgatcgtcagctggtgcaggaatacttcgaacactaccac
acgccggcgcgtccgccttcgatccggtttctgtaa
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