Roseomonas marmotae: IAI58_13935
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Entry
IAI58_13935 CDS
T08030
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
rmt
Roseomonas marmotae
Pathway
rmt01501
beta-Lactam resistance
rmt01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
rmt00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
IAI58_13935
01503 Cationic antimicrobial peptide (CAMP) resistance
IAI58_13935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rmt03036
]
IAI58_13935
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rmt02000
]
IAI58_13935
01504 Antimicrobial resistance genes [BR:
rmt01504
]
IAI58_13935
Chromosome and associated proteins [BR:
rmt03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
IAI58_13935
Transporters [BR:
rmt02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
IAI58_13935
Antimicrobial resistance genes [BR:
rmt01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
IAI58_13935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YknX_C
BSH_RND
RND-MFP_C
HH_MFP_RND
Beta-barrel_RND
BSH_CzcB
CzcB_C
BSH_CusB
HH_YBHG
HH_AAEA_pHBA
BSH_YknX
HH_EMRA
Aldedh
BSH_LcnD
Motif
Other DBs
NCBI-ProteinID:
QTI78746
LinkDB
All DBs
Position
2979441..2980670
Genome browser
AA seq
409 aa
AA seq
DB search
MTFPTRRGTAHDVVRLGRLALLALPLLLPLAPSYAQQPGGPPPAVGVAPVTSRPITEANE
FIGQIDAVDRVDLQSRVTAFLQERLFEEGSEVKKGDLLFRLERPPFEASLQVAKAAVAQS
QAQLQNANLTLGRAEALLRTPAGQRSTVDAAVAAARTAQAQLLSAQAQERQAQIELNYTE
IRAPIDGRIGLASVTPGNVVTPSSGALATIVSQDPMYVSFTVPTRTLLELRERYAQRGGL
NAVALKLRLPDGRIYSHSGTVDFVNIDVSRDTDSIAMRGSIPNPRLPQQQGGGRELVVNQ
LVSAILEALQPVPMLTVPRDAVLTDQQGDFVYVIGEGNRAERRSIRVGPQSNAELAVVTE
GLRQGEQVVVEGLQRVRPGTPVSPTPVGGGGAPAGAGQQQGGASPQRGG
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgaccttcccaactcgtcgtgggacggcccacgatgtcgtgcgccttgggcgcttggca
ttgcttgccctgccgctgctgctgcccctggctccttcctacgcgcagcagccgggcggc
cctccgcccgcagtcggcgtagccccggtgaccagccggcccatcacagaggccaatgaa
ttcatcggccagatcgacgcggtcgatcgcgtggacctgcaatcccgcgtgaccgccttc
ctgcaggaacgcctcttcgaggaaggctccgaggtgaagaagggcgacctgctcttccgg
ctcgaacgccctcccttcgaggcttccttgcaggtcgcaaaggccgccgtggcccagagc
caggcccagctgcagaatgccaacctgaccctgggccgcgccgaagcactgctccgcacg
ccagctggccagcgctccaccgtggatgctgccgtcgccgccgcgcgcaccgcgcaggcg
cagctgctttccgcccaggcgcaggaacggcaggcgcagatcgagctgaactacaccgag
atccgcgcgcccatcgacggccgcatcggcctcgcctcggtgacgccggggaacgtggtc
acgccttcctccggcgcgctcgccaccatcgtcagccaggacccgatgtatgtctccttc
accgtgccgacgcgcacgctgctggagctaagggaacgttatgcacagcgcggcggcctg
aacgccgtggcgctgaagctgcggctgccggatggccgcatctacagccacagcggcaca
gtggacttcgtcaatatcgatgtcagccgcgacaccgacagcatcgcgatgcgcggcagc
atcccgaatccgcgcctgccgcaacagcaaggcggcgggcgtgagctggtggtcaaccag
ctggtgtccgcgatcctggaagcgttgcagccggtgccgatgctgacagttccccgggac
gcggtattgaccgaccagcagggcgacttcgtctatgtcatcggcgaggggaacagggcc
gagcgccgcagcatccgcgtcggcccccagtccaacgccgaactggccgtggtgaccgag
gggctgcggcagggtgagcaggtggtggtggaagggctgcagcgcgtccgtccgggcacg
cccgtctcccccaccccggtcggtggcggcggcgccccggcgggcgcgggtcagcagcag
ggcggcgcctcgccgcagcgcgggggctga
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