Rattus norvegicus (rat): 100190936
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Entry
100190936 CDS
T01003
Symbol
Rnf123
Name
(RefSeq) E3 ubiquitin-protein ligase RNF123
KO
K12169
Kip1 ubiquitination-promoting complex protein 1 [EC:
2.3.2.27
]
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rno04121
]
100190936 (Rnf123)
Enzymes [BR:
rno01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100190936 (Rnf123)
Ubiquitin system [BR:
rno04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100190936 (Rnf123)
Multi subunit type E3
KPC complex
100190936 (Rnf123)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-C3HC4_3
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
100190936
NCBI-ProteinID:
NP_001178509
RGD:
2301394
Ensembl:
ENSRNOG00000033378
LinkDB
All DBs
Position
8:complement(117618776..117646400)
Genome browser
AA seq
1312 aa
AA seq
DB search
MTSKGAAMSFSRKSYRLTSDAEKSRVTGIVQEKLLSDYLYRIFSSPDHGTPAATSRKPLN
FHNLPEHVDQLLQVDDEESQGQVEGRLGPSTVVLDHTGGFEGLLLVDDDLLGVIGHSNFG
TIRSSTCVYKGKWVYEVLISSQGLMQIGWCTINCRFNQEEGVGDTHNSYAYDGNRVRKWN
VTTTNYGKAWAAGDIVSCLIDLDDGTLSFCLNGVSLGTAFENLSRGLGMAYFPAISLSFK
ESVAFNFGSRPLRYPVAGFRPLQDPPFADLVRAQRLLGCFQTVLSVELDPVEGRLVEKES
SEWQLHGQPTVLLTLAHIFHHFAPLLRKVYLVEAVLMSFLLGIVEKGTPEQAQSVVHQIL
DLLWLFMEDYEVQDCLKQLMMSLLRLYRFSPIVPDLGLQIHYLRLTMAVLRHEKSRKFLL
SNVLFDMLRSVVFFYIKSPLRVEEAGLKELIPTTWWPHRSSREGRDGQEAKEETTEERQR
RRAYERGCQRLKKRIEVVEELQVQILKLLLDNKDDNGGEASRYIFLTKFRKFLQENASGR
GNTPVLCPPEYMVCFLHRLVSALRFYWDEYKASNPRASFSDEAYIPPQIFYNGKVDYFDL
QRLGGLLSHLRKTLKDDLASKANIVIDPLELQAATMDDLDEDEEPAPTAAQRPVQALAIG
GALPLPRPGWLSSPTLGRANRFLSTAAVSLMTPRRLLSTMEKVKVRSLNVEQRTREDIEG
SHWNEGLLLGRPPEEPERPLTENSLLEVLDGTVMMYSLSVHQQLGKMVGVSDDVNEYAMA
LRDTEDKLRRCPKRRKDILAELTKSQKVFSEKLDHLSRRLAWVHATVYSQEKMLDIYWLL
RVCLQTIEHGDRTGSLFAFMPEFYLSVAINSYSALKNYFGPVHSMEELPGYEETLTRLAA
ILAKHFADPRIVGTDIRDSLMQALASYVCYPHSLRAVERIPEEQRIAMVRNLLAPYEQRP
WAQTNWILVRLWRGCGFGYRYTRLPHLLKTKPEDANLPSLQKPCPSTLLQQHMADLLRQG
SDVAPSFLNSVLNQLNWAFSEFIGMIQEIQQAAERLERNFVDSRQLKVCATCFDLSVSLL
RVLEMTITLVPEIFLDWSRPTSEMLLRRLAQLLNQVLNRVTAERNLFDRVVTLRLPGLES
VDHYPILVAVTGILVRLLAHGPSSETEQATSVLLADPCFQLRSIRYLLGQPEPLAPGSAL
PAPDRKRFSLQSYADYISAEELAQVERMLAHLTAASAQAAAASLPTNEEDLCPICYAHPI
SAVFQPCGHKSCKACINQHLMNNKDCFFCKATIVSVEDWDKAASTSATSSAA
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccaagggggctgccatgtctttctcccgaaagagctataggttgacctcagat
gctgagaagtccagggtcacaggcattgtgcaagagaagctactgagcgactacctgtac
cggatcttttcctctcctgaccatgggacccctgcagccaccagcaggaaaccgctgaac
ttccataacctgccagagcatgtggaccagctgctgcaggtggacgacgaagagagccag
ggacaagttgaaggccgacttggcccatctactgtggtcctagaccacacaggaggcttt
gaggggcttctccttgtggacgatgacctcctgggggtgattggacacagcaactttggc
actatccgttcttccacatgtgtgtacaaagggaaatgggtctacgaggtgctcatctcc
tcccaggggctcatgcagatcggctggtgtaccatcaactgccgctttaatcaggaggaa
ggggttggagatacacacaactcctatgcctatgacggcaaccgagtgcgcaagtggaac
gtgacgacgacgaactacggcaaggcatgggcagcgggggacattgtgagctgcctcatt
gatctggatgatggtactctgtccttttgcctgaatggtgtgtcactgggcactgccttt
gagaacctttccaggggcctaggaatggcgtacttcccagccatcagcctgtcgttcaag
gagtctgtggcattcaactttggcagccgacctttgcgctacccagttgcgggcttccgg
cccctgcaggaccctccctttgctgacctggtccgggcacagaggttgctgggctgcttc
cagacagtgctaagtgtagagctggaccctgtggaagggcggttggtggagaaggagagc
tctgagtggcagctgcacgggcagcccactgtcctcctcacgctggcccacatcttccat
cactttgcaccactgctgcgcaaggtgtacctagtggaggctgtgctcatgagcttcctg
ctgggcattgtggagaagggcacccctgagcaggcccagtccgtggtacaccagatcttg
gacctcttgtggctcttcatggaggactatgaagttcaggattgcctcaagcagttgatg
atgtctctgctacgtctctaccgattctcgcccattgttccggacctgggtctacagatc
cactacctgcgcctcactatggccgtcctgagacatgagaagtcccgcaagttcctgctt
agcaatgtcctttttgacatgctccggtccgtggtcttcttttacattaagagtcccctg
cgtgtggaggaagctggcctgaaggaactcatccccaccacctggtggccccatcgctcc
agcagggagggcagagacggtcaggaagcaaaggaggagaccacggaagagcggcagcgg
aggagagcttacgagcgtggctgccaaagactcaagaaacgcattgaagtggtggaagaa
ctgcaggtccagatcctgaagctgctgttggacaacaaagatgacaatgggggtgaagct
tctcggtacatctttctgacaaaattccgaaagttcctgcaggagaatgccagtggccgg
gggaacacacccgtgctctgcccccctgagtacatggtctgtttcctacaccggctggtg
tctgccttgcgtttctattgggatgaatacaaagcttccaacccccgtgcttcctttagc
gatgaggcttatatcccgcctcagatcttctataatggcaaggtggactacttcgacctt
cagcgcctcgggggcctcctctcacaccttcgaaagacccttaaagatgaccttgcttcc
aaagccaatatcgtgattgatcccctggagctccaggcagccaccatggatgacctggat
gaggatgaagagccggcccccacagcagcccagcgtcccgtgcaagcactggccatagga
ggggccctgcccctgccccggcctggctggctaagttctccaaccctgggccgagccaac
cgtttcctcagcacagcagccgtgagcctcatgaccccacggcggcttctgagcaccatg
gagaaagtaaaagttcgctccctgaatgtggaacagaggacccgtgaggacattgagggc
agccactggaatgagggtctgctgttggggaggccccctgaagagcctgagcggccgctt
acggaaaactcgctgttggaagttctggatggcacagtcatgatgtacagtctgagcgtt
caccagcagctgggcaagatggtgggtgtgtctgatgatgtcaacgagtatgcaatggcc
ctgagagacaccgaggacaagctacgtcggtgccctaagaggaggaaggatatccttgca
gagttgaccaagagccagaaggttttctcagaaaagctggaccacctgagccgcaggctt
gcctgggtccatgccaccgtctactcacaggagaaaatgctggatatctactggttactg
cgtgtctgcctacagaccattgagcatggggatcgcacaggatctctctttgccttcatg
cccgagttttacctaagtgtggctatcaacagctacagtgcccttaagaattattttggc
cctgtgcacagcatggaggagctcccaggctatgaagagaccctgacccgcttagctgcc
atcctcgccaaacactttgctgaccctcgaatagtaggcactgacattcgagactcgctg
atgcaggccctggccagttacgtgtgttacccacattccctgcgggccgtggaacggatc
cccgaggagcagcgcatcgccatggtgaggaaccttttggccccctatgagcaacgaccc
tgggcccagaccaactggatcctggtgcggctttggaggggctgtggttttgggtaccgc
tacacacggctgccacatctgctgaaaaccaagccagaggatgctaatttgccaagcctc
caaaagccctgcccttcaaccttgctacagcagcacatggcagaccttctgcgacaaggt
tctgatgtggcaccaagcttcctcaacagcgtccttaaccagctcaactgggccttctct
gagttcatcggcatgatccaggagattcaacaggctgctgaacgcctagagcgaaacttt
gtggacagccggcagctcaaggtctgtgccacctgcttcgacctgtcagtcagcttgctg
cgcgtcttggaaatgaccatcacactggtccctgaaatcttccttgactggtcccgccct
acctctgagatgctgcttcggcgtcttgcacagctgctgaaccaggtgctgaaccgggtg
acagctgagaggaacctgtttgaccgtgtagtcacgctgcggctacctgggctggagagt
gtggaccactaccctatcttggtggcagtgaccggcatcctggtacgcctcctggcacac
ggtccatcctcagagacagagcaagccacatctgtgctcctggctgatccctgcttccag
ctccgctctatacgctatctcctggggcagccagagcccctagcacctggctccgccttg
cctgcccctgaccggaaacgcttctctctacagagctatgcagattacatcagtgctgag
gagctggcccaggtggaacggatgctggctcacctgaccgcggcatcggcccaggcagca
gctgcctccctgcccaccaatgaggaggacctctgcccaatctgctatgcccaccccatc
tctgctgtgttccagccttgtggtcacaaatcctgcaaagcctgcatcaaccagcatctg
atgaacaacaaggactgcttcttctgcaaagccaccattgtatctgtagaggactgggac
aaggcagccagcacaagtgccacatcctcagctgcctag
DBGET
integrated database retrieval system
