KEGG   Rattus norvegicus (rat): 103689969
Entry
103689969         CDS       T01003                                 
Symbol
Kdm6a
Name
(RefSeq) lysine-specific demethylase 6A isoform X1
  KO
K11447  lysine-specific demethylase 6A [EC:1.14.11.68]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno05202  Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:rno00001]
 09160 Human Diseases
  09161 Cancer: overview
   05202 Transcriptional misregulation in cancer
    103689969 (Kdm6a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    103689969 (Kdm6a)
Enzymes [BR:rno01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.68  [histone H3]-trimethyl-L-lysine27 demethylase
     103689969 (Kdm6a)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    MLL3/MLL4 complex
     103689969 (Kdm6a)
   Histone demethylases
    103689969 (Kdm6a)
SSDB
Motif
Pfam: KDM6_C-hel JmjC TPR_1 KDM6_GATAL TPR_2 TPR_8 TPR_16 TPR_17 TPR_12 TPR_19 TPR_CcmH_CycH TPR_7 TPR_9 TPR_11 ANAPC8 ARM_TT21_C SNAP ANAPC3
Other DBs
NCBI-GeneID: 103689969
NCBI-ProteinID: XP_038956287
RGD: 9275041
Ensembl: ENSRNOG00000052721
LinkDB
Position
X:complement(6920374..7060027)
AA seq 1475 aa
MKSCGVSLATAAAAAAFGDEEKKMAAGKASGESEEASPSLTAEEREALGGLDSRLFGFVR
FHEDGARMKALLGKAVRCYESLILKAEGKVESDFFCQLGHFNLLLEEYPKALSAYQRYYS
LQSDYWKNAAFLYGLGLVYFHYNAFQWAIKAFQEVLYVDPSFCRAKEIHLRLGLMFKVNT
DYESSLKHFQLALVDCNPCTLSNAEIQFHIAHLYETQRKYHSAKEAYEQLLQLENLSAQV
KATVLQQLGWMHHTVDLLGDKATKESYAIQYLQKSLEADPNSGQSWYFLGRCYSSIGKVQ
DAFISYRQSIDKSEASADTWCSIGVLYQQQNQPMDALQAYICAVQLDHGHAAAWMDLGTL
YESCNQPQDAIKCYLNATRSKNCSNTSGLAARIKYLQAQLCNLPQGSLQNKTKLLPSIEE
AWSLPIPAELTSRQGAMNTAQQACKPHHPNTEPVLGLSQTPISQQSLPLHMIPPSQVDDL
SSPAKRKRTSSPTKNTSDNWSGGNAVPHPPVQQQTHSWCLTPQKLQHLEQLRANRNNLNP
AQKLMLEQLESQFVLMQQHQMRQTGVAQVRPTGIPNGPTADSSLPTNSASGQQPQLPLTR
MPSVSQPGVQPACPRQALANGPFSAGHVPCSTSRTLGSTDTILIGNNHVTGSGSNGNVPY
LQRNAPTLPHNRTNLTSSTEEPWKNQLSNSTQGLHKGQSSHLAGPNGERPLSSTGPSQHL
QAAGSGIQNQNGHPTLPSNSVTQGAALNHLSSHTATSGGQQGITLTKESKPSGNTLTLPE
TNRQTGETPNSTASVEGLPNHVHQVMADAVCSPSHGDSKSPGLLSSDNPQLSALLMGKAN
NNVGPGTCDIVNNIHPTVHTKTDNSVASSPSSAISTATPSPKSTEQTTTNSVTSLNSPHS
GLHTINGEGMEESQSPIKTDLLLVSHRPSPQIIPSVSVSIYPSSAEVLKACRNLGKNGLS
NSSILLDKCPPPRPPSSPYPPLPKDKLNPPTPSIYLENKRDAFFPPLHQFCTNPNNPVTV
IRGLAGALKLDLGLFSTKTLVEANNEHMVEVRTQLLQPADENWDPTGTKKIWHCESNRSH
TTIAKYAQYQASSFQESLREENEKRSHHKDHSDSESTSSDNSGKRRRGPFKTIKFGTNID
LSDDKKWKLQLHELTKLPAFVRVVSAGNLLSHVGHTILGMNTVQLYMKVPGSRTPGHQEN
NNFCSVNINIGPGDCEWFVVPEGYWGVLNDFCEKNNLNFLMGSWWPNLEDLYEANVPVYR
FIQRPGDLVWINAGTVHWVQAIGWCNNIAWNVGPLTACQYKLAVERYEWNKLQSVKSIVP
MVHLSWNMARNIKVSDPKLFEMVKYCLLRTLKQCQTLREALIAAGKEIIWHGRTKEEPAH
YCSICEVEVFDLLFVTNESNSRKTYIVHCQDCAWKTSGNLENFVVLEQYKMEDLMQVYDQ
FTLVSEINMLLHYHPPHLDIVPWTLNMRPFLLFRK
NT seq 4428 nt   +upstreamnt  +downstreamnt
atgaaatcctgcggagtgtcgctcgctactgccgccgccgccgccgctttcggtgatgag
gaaaagaaaatggcggcgggaaaagcgagcggcgagagcgaggaggcgtcccctagcctg
acagccgaagagagggaggcgctcggtggactggacagccgccttttcgggttcgtgagg
tttcatgaagatggcgccaggatgaaggccctgctgggcaaggctgttcgctgctacgaa
tctctgatcttaaaagctgaaggaaaagtggagtctgatttcttttgtcaattaggtcac
ttcaacctcttattggaagagtatccaaaagcattatctgcataccagaggtactacagt
ttacagtctgactactggaagaatgctgcctttttatatggtcttggtttggtctacttc
cattacaatgcatttcagtgggctattaaagcatttcaggaggtgctttatgttgatccc
agcttttgtcgagccaaggaaattcatttacgacttgggcttatgttcaaagtgaataca
gactatgagtctagtttaaagcattttcagttagctttggttgactgcaatccctgcact
ttgtccaatgctgaaattcagtttcacattgcccacttatatgaaacccagaggaagtat
cattctgcaaaagaagcttatgagcaacttttgcagctagaaaacctttctgcacaagta
aaagcaactgtcttacaacaattaggttggatgcatcacactgtggatctcctaggagat
aaggccaccaaggaaagttatgctattcaatatctccagaagtccttggaagcagatcca
aattctggccagtcctggtatttccttggaaggtgctattcaagtattgggaaagttcag
gatgcctttatatcttacaggcaatctattgataaatctgaagcaagtgcagatacatgg
tgttcaataggtgtgctctatcaacagcaaaatcagcctatggatgctttacaagcttat
atttgtgctgtacaattggaccatggccatgctgcagcctggatggatctaggcactctc
tatgaatcctgcaaccagcctcaagatgctattaaatgctatttaaatgcaactagaagc
aaaaattgtagtaatacctctggacttgcagcacgaattaaatatttacaggctcagttg
tgtaaccttccacaaggtagtctacagaataaaactaaattacttcctagtattgaggag
gcatggagcctaccaattcccgcagagcttacctccaggcagggtgccatgaacacagca
cagcaggcatgtaaacctcatcatccaaatactgaacctgtattaggcctcagtcaaaca
ccaatttcacagcagtccttgccactacacatgattcctcctagccaagtagatgacctg
tccagtcctgccaagaggaaaagaacatctagtccaacaaagaatacttctgataattgg
agtggtggcaatgctgtgccacatcctccagtacaacaacaaactcattcatggtgtttg
acaccacagaaattacagcacttggagcagctccgagcaaatagaaataatttaaatcca
gcacagaaactaatgctggaacagctggaaagtcagtttgtcttaatgcagcaacaccaa
atgagacaaacaggagttgcacaggttcggcctactggaattcctaatgggccaacagct
gactcatcactgcctacaaattcagcttctggccagcagccacagcttcctttgaccaga
atgcctagtgtctctcagcctggagtccaacctgcctgtcccagacaggctttggccaat
ggacccttttctgcaggccatgttccctgtagcacatcaagaacactgggaagtacagac
actattttgataggcaataatcatgtaacaggaagtggaagtaatggaaacgtgccttac
ctgcagcgaaacgcacccactctacctcataaccgcacaaacctgaccagcagcacagag
gagccgtggaaaaaccaactatctaactccactcaggggcttcacaaaggtcagagttca
catttggcaggtcctaatggtgaacgacctctttcttccactgggccttcccagcatctc
caggcagctggctctggtattcagaatcagaatggacatcccaccctgcctagcaattca
gtaacacagggggctgctctcaatcacctctcctctcacactgctacctcaggtggacaa
caaggcattaccttaaccaaagagagcaagccttcaggaaacacattgacactgcctgaa
acaaacaggcaaactggagagacacctaacagcactgccagtgttgagggacttcctaat
catgtccatcaggtgatggcagatgctgtttgcagtcctagccatggagattctaagtca
ccaggtttactaagttcagacaatcctcagctctctgccttgttgatgggaaaagctaat
aacaatgtgggtcctggaacctgtgacatagtcaataacatccacccaactgtccataca
aagactgataattctgttgcctcttcaccatcttcagccatttccacagcaacaccttct
cctaaatccactgagcagacaaccacaaacagtgttaccagccttaacagccctcacagt
gggctgcacacaattaatggagaaggaatggaagaatctcagagccccatcaaaacagat
ctgcttctagttagccacagacccagtcctcagatcataccatcagtgtctgtgtctata
tatcccagctcagcagaagttctgaaagcttgcaggaatctaggtaaaaatggcctgtct
aatagtagcattctgttggataaatgtccacctccaagaccaccatcctcaccatatcct
cccttgccaaaggacaagttgaatccacctacacctagtatttatttggaaaataaacgt
gatgctttctttccaccattacatcaattttgtacaaatccaaacaaccctgttacagta
attcgtggccttgctggagctcttaaattagacttgggacttttctctactaaaactttg
gtggaagctaacaatgaacatatggtagaagtgaggacacagttgttacaaccagcagat
gaaaattgggaccctactggaaccaagaaaatctggcactgtgaaagcaatagatctcat
actacaattgctaaatatgctcagtaccaggcctcctcgttccaagaatcattgagagaa
gaaaatgagaaaagaagtcaccataaagaccactcggacagtgaatctacatcatcagat
aattctgggaaaaggagaaggggaccctttaaaaccattaagtttgggaccaacattgac
ctgtctgatgacaaaaagtggaagttacagctacatgagctgactaaacttcctgccttt
gtgagagttgtatcagcaggaaatcttctaagccatgttggtcatactatactgggcatg
aacacagttcaactatacatgaaagttccaggaagcagaacaccaggtcatcaagaaaat
aacaacttctgttcagttaatataaatattggcccaggtgactgtgaatggtttgttgtt
cctgaaggctactggggtgttctgaacgacttctgtgaaaaaaataatttgaatttctta
atgggttcttggtggcccaaccttgaagatctttatgaagcaaatgttccagtatatagg
tttattcagcgacctggagatctggtctggataaatgcaggaactgttcattgggttcaa
gctattggctggtgcaacaacattgcttggaatgttggtccacttacagcctgtcagtat
aagttagcagtggaacggtatgaatggaacaaattgcaaagtgtaaagtcaatagtaccc
atggttcatctttcctggaatatggcacgaaatatcaaggtttcagatccaaagcttttt
gaaatggttaagtattgtcttctgagaaccctgaagcaatgtcagacattgagggaagct
ttaattgctgcaggaaaagagatcatatggcacgggcggacaaaagaagaaccagctcat
tattgtagcatttgtgaggtggaggtttttgatctgctttttgtcactaatgagagtaat
tctcgaaagacctacatagtacattgccaagattgtgcatggaaaacaagtgggaatctg
gaaaattttgtggtgctagaacagtacaaaatggaggatctgatgcaagtctatgaccaa
tttacattagtaagtgaaatcaacatgctcctccattaccatccgcctcatcttgatatt
gttccatggacattaaacatgagaccttttctgctattcaggaagtaa

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