Rattus norvegicus (rat): 113894
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Entry
113894 CDS
T01003
Symbol
Sqstm1
Name
(RefSeq) sequestosome-1 isoform 1
KO
K14381
sequestosome 1
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04137
Mitophagy - animal
rno04140
Autophagy - animal
rno04217
Necroptosis
rno04218
Cellular senescence
rno04380
Osteoclast differentiation
rno05014
Amyotrophic lateral sclerosis
rno05022
Pathways of neurodegeneration - multiple diseases
rno05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113894 (Sqstm1)
04137 Mitophagy - animal
113894 (Sqstm1)
09143 Cell growth and death
04217 Necroptosis
113894 (Sqstm1)
04218 Cellular senescence
113894 (Sqstm1)
09150 Organismal Systems
09158 Development and regeneration
04380 Osteoclast differentiation
113894 (Sqstm1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
113894 (Sqstm1)
05022 Pathways of neurodegeneration - multiple diseases
113894 (Sqstm1)
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
113894 (Sqstm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
113894 (Sqstm1)
03029 Mitochondrial biogenesis [BR:
rno03029
]
113894 (Sqstm1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rno04147
]
113894 (Sqstm1)
Membrane trafficking [BR:
rno04131
]
Autophagy
Mitophagy
Cargo receptors
113894 (Sqstm1)
Pexophagy
113894 (Sqstm1)
Aggrephagy
113894 (Sqstm1)
Xenophagy
113894 (Sqstm1)
Other autophagy associated proteins
Midbophagy
113894 (Sqstm1)
Mitochondrial biogenesis [BR:
rno03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
113894 (Sqstm1)
Exosome [BR:
rno04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
113894 (Sqstm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_5
PB1
ZZ
Motif
Other DBs
NCBI-GeneID:
113894
NCBI-ProteinID:
NP_787037
RGD:
69287
Ensembl:
ENSRNOG00000003147
UniProt:
O08623
Structure
PDB
LinkDB
All DBs
Position
10:complement(35026598..35037750)
Genome browser
AA seq
439 aa
AA seq
DB search
MASLTVKAYLLGKEEAAREIRRFSFCFSPEPEAEAAAGPGPCERLLSRVAVLFPALRPGG
FQAHYRDEDGDLVAFSSDEELTMAMSYVKDDIFRIYIKEKKECRREHRPPCAQEARSMVH
PNVICDGCNGPVVGTRYKCSVCPDYDLCSVCEGKGLHREHSKLIFPNPFGHLSDSFSHSR
WLRKLKHGHFGWPGWEMGPPGNWSPRPPRAGDGRPCPTAESASAPSEDPNVNFLKNVGES
VAAALSPLGIEVDIDVEHGGKRSRLTPTSAESSSTGTEDKSGTQPSSCSSEVSKPDGAGE
GPAQSLTEQMKKIALESVGQPEELMESDNCSGGDDDWTHLSSKEVDPSTGELQSLQMPES
EGPSSLDPSQEGPTGLKEAALYPHLPPEADPRLIESLSQMLSMGFSDEGGWLTRLLQTKN
YDIGAALDTIQYSKHPPPL
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgctcacggtgaaggcctatctactgggcaaggaggaggcggcccgcgagatc
cgccgcttcagcttctgcttcagcccggagccggaggcggaagccgcggctggcccgggg
ccctgcgagaggctgctgagccgggtggctgtgctgttccccgcgctgcggcctggaggc
tttcaggcgcactaccgcgatgaggatggggacttggtcgccttctccagtgatgaggaa
ctgacaatggccatgtcctatgtgaaagatgacatcttccgcatctacattaaagagaag
aaggagtgccggcgggaacatcgccccccatgtgctcaggaggcacgaagcatggtgcac
cccaacgtgatttgtgatggttgcaatgggcctgtggtgggaactcgctataagtgcagt
gtgtgccccgactacgacctgtgcagcgtctgcgaggggaagggcctgcacagggagcac
agcaagctcatctttcccaacccctttggccacctctctgatagcttctctcatagccgc
tggcttcggaagctgaaacatgggcactttggctggcctggctgggagatgggcccacca
gggaactggagcccacgtcctcctcgcgcaggggatggtcgcccttgccccacagctgag
tcggcttctgctccatcagaggatcccaatgtcaatttcctgaagaatgtgggggagagc
gtggcagctgccctcagccctctaggcatcgaggttgacattgatgtggaacatggaggg
aagagaagccgcctgacacccacctctgcagaaagttccagcacaggcacagaagataag
agtggtactcagccaagcagctgctcttcggaagtcagcaaacctgacggggccggggag
ggccctgctcagtctctgacagagcagatgaagaagatagccttggagtcggtgggacag
ccagaggaactgatggagtcggataactgctcaggaggggatgacgactggacgcatttg
tcttctaaagaagtggacccatccacaggtgaactccagtctctacagatgccagaatcg
gaagggccaagctctctagacccctcacaggaaggccccacagggctgaaggaagctgcc
ctgtacccacatctcccaccagaggctgatccccggctgattgagtcactctctcagatg
ctgtccatgggtttctcggatgaaggcggctggctcaccaggctcctacagaccaagaat
tatgacatcggggctgctctggacacgatccagtattcaaagcaccctccaccattgtga
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integrated database retrieval system