Rattus norvegicus (rat): 116782
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Entry
116782 CDS
T01003
Symbol
Pcdhgc3
Name
(RefSeq) protocadherin gamma-C3
KO
K16497
protocadherin gamma subfamily C
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rno04515
]
116782 (Pcdhgc3)
Cell adhesion molecules [BR:
rno04515
]
Cadherins
Protocadherins
116782 (Pcdhgc3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_tail
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
116782
NCBI-ProteinID:
NP_446395
RGD:
620746
UniProt:
I6LBX8
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Position
18:29884245..29919095
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AA seq
934 aa
AA seq
DB search
MVAEARSSGLVSPGRTVGVLLLLAALTEASTIIHYEILEEREKGFPVGNVVTDLGLDLGS
LSARRLRVVSGASRRFFEVNWETGEMFVNDRLDREELCGTLPSCTVTLELVVENPLELFS
AEVVVQDINDNNPSFPTAEMKLEISEAMAPGTRFPLESAHDPDVGSNSLQTYELSHNEYF
ALRVQTREDGTKYAELVLERALDWEREPSVQLVLTALDGGTPARSATLPIRITVLDANDN
APAFNQSLYRARVREDAPPGTRVAQVRATDLDEGLNGEIVYSFGSHNRAGVRELFALDLV
TGVLTIKGRLDFEDTKLHEIYIQAKDKGANPEGAHCKVLVEVVDVNDNAPEITVTSVYSP
VPEDAPLGTVIALLSVTDLDAGENGQVTCEVPPGLPFSLTSSLKNYFTLKTSAALDRETV
PEYNLSITARDSGTPSLSALTTVRVQVSDINDNPPQSSQSSYDVYVEENNLPGVPILNLS
VWDPDAPPNARLSFFLLEPGAETGLVGRYFTINRDNGILTTLVPLDYEDQREFQLTAHIN
DGGTPVLATNISVNIFVTDRNDNAPQVLYPRPGQSSVEVLPRGTAAGHVVSRVVGWDADA
GHNAWLSYSLMGAPNQSLFAVGLHTGQISTARPIQDTDSPRQILTVLISDNGEPLLSTTA
TLTVSVTEESPEARAEFPSGSAPREQNKNLTFYLLLSLILVSVGFAVTVLGVIIFKVYKW
KRSRDLYRAPVSSLYRTPVSSLHADAVRGGLMPPHLYHQVYLTTDSRRSDPLLKKPGAAS
PLASRQNTLRSCDPVFYRQVLGAESAPPGQQAPPNTDWRFSQAQRPGTSGSQNGDETGTW
PNNQFDTEMLQAMILASASEAADGSSTLGGGTGTMGLSARYGPQFTLQHVPDYRQNVYIP
GSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggtcgcagaggcccggagcagcggactggtaagccccgggagaacggtgggagttttg
cttctgctagctgccttgaccgaggcttccaccatcattcactatgagatcctggaggag
agagagaaggggtttcccgtgggtaacgtggtcacggatcttggtttggatctcggcagt
ctgtcggcccgcaggctccgggtggtgtccggagctagccgtaggttctttgaggtgaac
tgggagactggagagatgttcgtcaacgatcgactggaccgagaggagctgtgtgggacg
ctgccctcctgcactgtaactctggagttggtggtagagaacccgctggagctgttcagc
gcggaagtggtggtccaggacatcaacgacaacaatccctctttccccaccgcggaaatg
aaattggagattagcgaggccatggcgccggggacgcgctttccgctcgagagcgcgcac
gatcccgatgtgggaagcaactctttacaaacctatgagctgagccacaacgagtacttt
gcgctccgcgtgcagactcgagaggacggcacgaaatacgcggagctggtcctggagcgc
gccctagattgggaacgggagccaagtgtccagttggtactgaccgcacttgatggagga
accccagctcgctccgccacccttccaattcgtatcacagtgctggacgcgaatgacaat
gctcctgccttcaatcagtctttgtatagggcgcgcgtccgggaggatgcacccccaggc
acgcgcgtcgcccaggttcgtgcaactgacctggatgagggcctcaatggagaaatcgtt
tactccttcggcagccacaatcgtgctggggtgcgggaactattcgctttagacctcgta
accggggtgctgacaatcaagggtcgcctggactttgaagacaccaaactccatgagatt
tacatccaggccaaagacaaaggtgccaatccggaaggagcgcattgcaaagtactggta
gaggttgtggacgttaatgacaatgccccggagatcacagtcacctctgtatacagccca
gtccctgaggatgctcctctggggactgtcattgctttgctcagtgtgactgatctggat
gctggagagaacgggcaggtgacctgcgaggttcccccgggtctccccttcagcctgact
tcttccctcaagaattacttcactttgaaaaccagtgcagccctggatcgtgagaccgtg
cccgaatacaatctcagtatcacagctcgagactcgggaactccctctctctcagctctt
acaacagtcagggtccaagtgtccgatatcaacgacaatcctcctcagtcatcccaatcc
tcctacgatgtgtatgtggaggaaaataacctacccggagttcctatattaaacctaagt
gtctgggaccccgacgccccgcccaatgcccgcctttctttctttctcttggaacccgga
gcggaaactggtctcgtaggtcgctatttcacaataaatcgtgacaatggaatcttgaca
accttagtacccctggactatgaggatcagagagagttccagctaaccgctcatataaac
gacggaggtaccccggttttggccaccaacatcagcgtgaacatatttgttactgaccgc
aatgacaacgccccccaggtcctgtatccccggcctggccagagttcagtggaggtgctg
cctcgaggtacagcggcgggccacgtggtctcacgggtggtaggctgggacgcagatgca
gggcacaatgcctggctctcctacagcctcatgggagcccccaaccagagcctttttgcc
gtggggcttcacacgggtcagatcagcactgcccgcccaatccaggacacagattcacca
agacagattctcacagtcttgatctcagacaatggagaaccattgctctccaccaccgcc
accctgactgtgtcagtaactgaggagtctccggaagcccgggccgagttcccttctggc
tcagctccccgagaacagaacaaaaatctcaccttttatctacttctttctctaatctta
gtctctgtgggattcgcagttacagtgttgggagtgatcatattcaaagtttacaagtgg
aagcggtctagggacctctaccgagccccagtgagctccctgtaccgaaccccagtgtcc
tccttgcacgcagacgcggtgcgaggaggcctaatgccgccgcacctgtaccatcaggtg
tacctcaccacggactctcgccgcagcgacccactgctgaagaagcctggtgcggccagc
ccactggccagccgccagaacacgctgcgaagttgtgatcccgtgttctatagacaggtg
ttgggtgcagagagcgccccccctggacagcaagccccgcccaacactgactggcgtttc
tctcaagcccagagacccggcacgagcggatcccaaaatggggatgaaaccggcacctgg
cccaacaaccagttcgatacagagatgctgcaagccatgatcttggcctctgccagtgaa
gccgctgatgggagctccactctgggagggggcactggcactatgggtttgagcgctcga
tatggaccccagtttaccctgcagcacgtgcctgactaccgccagaacgtgtacatccct
ggcagcaatgccacactgaccaacgcagctggcaaacgagatggcaaggctccggcaggc
ggcaatggcaacaagaagaagtcgggcaagaaagagaagaagtaa
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