Rattus norvegicus (rat): 120098222
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Entry
120098222 CDS
T01003
Name
(RefSeq) POTE ankyrin domain family member F
KO
K05692
actin beta/gamma 1
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03082
ATP-dependent chromatin remodeling
rno04015
Rap1 signaling pathway
rno04145
Phagosome
rno04210
Apoptosis
rno04390
Hippo signaling pathway
rno04510
Focal adhesion
rno04520
Adherens junction
rno04530
Tight junction
rno04611
Platelet activation
rno04613
Neutrophil extracellular trap formation
rno04670
Leukocyte transendothelial migration
rno04714
Thermogenesis
rno04810
Regulation of actin cytoskeleton
rno04814
Motor proteins
rno04820
Cytoskeleton in muscle cells
rno04919
Thyroid hormone signaling pathway
rno04921
Oxytocin signaling pathway
rno04971
Gastric acid secretion
rno05014
Amyotrophic lateral sclerosis
rno05100
Bacterial invasion of epithelial cells
rno05132
Salmonella infection
rno05135
Yersinia infection
rno05164
Influenza A
rno05205
Proteoglycans in cancer
rno05225
Hepatocellular carcinoma
rno05410
Hypertrophic cardiomyopathy
rno05412
Arrhythmogenic right ventricular cardiomyopathy
rno05414
Dilated cardiomyopathy
rno05416
Viral myocarditis
rno05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120098222
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
120098222
04390 Hippo signaling pathway
120098222
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120098222
09143 Cell growth and death
04210 Apoptosis
120098222
09144 Cellular community - eukaryotes
04510 Focal adhesion
120098222
04520 Adherens junction
120098222
04530 Tight junction
120098222
09142 Cell motility
04814 Motor proteins
120098222
04820 Cytoskeleton in muscle cells
120098222
04810 Regulation of actin cytoskeleton
120098222
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
120098222
04613 Neutrophil extracellular trap formation
120098222
04670 Leukocyte transendothelial migration
120098222
09152 Endocrine system
04921 Oxytocin signaling pathway
120098222
04919 Thyroid hormone signaling pathway
120098222
09154 Digestive system
04971 Gastric acid secretion
120098222
09159 Environmental adaptation
04714 Thermogenesis
120098222
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
120098222
09162 Cancer: specific types
05225 Hepatocellular carcinoma
120098222
09172 Infectious disease: viral
05164 Influenza A
120098222
09171 Infectious disease: bacterial
05132 Salmonella infection
120098222
05135 Yersinia infection
120098222
05100 Bacterial invasion of epithelial cells
120098222
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
120098222
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
120098222
05410 Hypertrophic cardiomyopathy
120098222
05412 Arrhythmogenic right ventricular cardiomyopathy
120098222
05414 Dilated cardiomyopathy
120098222
05416 Viral myocarditis
120098222
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rno03021
]
120098222
03019 Messenger RNA biogenesis [BR:
rno03019
]
120098222
03036 Chromosome and associated proteins [BR:
rno03036
]
120098222
03029 Mitochondrial biogenesis [BR:
rno03029
]
120098222
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rno04812
]
120098222
04147 Exosome [BR:
rno04147
]
120098222
Transcription machinery [BR:
rno03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120098222
Messenger RNA biogenesis [BR:
rno03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
120098222
Chromosome and associated proteins [BR:
rno03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
120098222
NuA4 complex
120098222
Chromatin remodeling factors
BAF complex
120098222
PBAF complex
120098222
GBAF(ncBAF) complex
120098222
SWR1 complex
120098222
Mitochondrial biogenesis [BR:
rno03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
120098222
Cytoskeleton proteins [BR:
rno04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
120098222
Exosome [BR:
rno04147
]
Exosomal proteins
Proteins found in most exosomes
120098222
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
120098222
NCBI-ProteinID:
XP_063133715
RGD:
41279374
LinkDB
All DBs
Position
18:complement(23900710..24602964)
Genome browser
AA seq
375 aa
AA seq
DB search
MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPNEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY
ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagaaatcgccgccctcgtcattgacaatggctccggcatgtgcaaagctggc
tttgctggggacgacgcccccagggccgtgtttccttccatcgtcgggcgcccccgacac
cagggtgtcatggtgggcatgggccagaaagactcgtacgtgggtgatgaggcccagagc
aagaggggtattctgaccctgaagtaccctaatgagcacggcattgtcaccaactgggac
gacatggagaagatctggcaccacaccttctacaacgagctgcgtgtggcccctgaggag
cacccggtgcttctgaccgaggcccccctgaaccccaaagctaacagagagaagatgacg
cagataatgtttgaaaccttcaataccccagccatgtacgtggccattcaggcggtgctc
tccttgtatgcatctgggcgtaccactggcattgtcatggactctggtgacggggtcaca
cacacagtgcccatctatgagggctacgcccttccccacgccatcttgcgtctggacctg
gctggccgggacctgacagactacctcatgaagatcctgactgaaaggggctacagcttt
accaccactgctgagagggaaattgttcgtgacataaaggagaagctgtgctatgttgcc
ctggattttgagcaagaaatggctactgctgcatcatcttcctctttggagaagagttat
gagctgcctgatgggcaggtgatcaccattggcaatgagcgcttccggtgtccagaggct
ctcttccagccttccttcctgggcatggagtcctgtggcatccacgagaccaccttcaac
tccatcatgaagtgtgatgtggacatccgcaaagacctgtatgccaacacagtgctgtct
ggtggtaccaccatgtatccaggcattgctgacaggatgcagaaggagatcacagccctg
gctcccagcacaatgaagattaagatcattgctcctcctgaacgcaagtactcagtctgg
attggcggctccatcctggcctcactgtccaccttccagcagatgtggatcagcaagcag
gagtatgatgagtcaggcccctccattgtccaccgcaaatgcttctag
DBGET
integrated database retrieval system
