Rattus norvegicus (rat): 170905
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Entry
170905 CDS
T01003
Symbol
Lfng
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe precursor
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
rno
Rattus norvegicus (rat)
Pathway
rno00514
Other types of O-glycan biosynthesis
rno04330
Notch signaling pathway
rno05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
170905 (Lfng)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
170905 (Lfng)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
170905 (Lfng)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rno01003
]
170905 (Lfng)
Enzymes [BR:
rno01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
170905 (Lfng)
Glycosyltransferases [BR:
rno01003
]
Glycan extension
O-Glycan
170905 (Lfng)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
170905
NCBI-ProteinID:
NP_596884
RGD:
620587
Ensembl:
ENSRNOG00000001250
UniProt:
Q924T4
A6K1R9
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All DBs
Position
12:complement(19144474..19152951)
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AA seq
378 aa
AA seq
DB search
MLQRCGRRLLLALVGALLACLLVLTADPPPTPVPAERGRRALRSLAGSSGAAPGPGSRAA
VDPGVLVREVHSLSEYFSLLTRARRDADPPPGVASRQGDGHPRPPAEVLSPRDVFIAVKT
TRKFHRARLDLLFETWISRHKEMTFIFTDGEDEALAKHTGNVVLTNCSAAHSRQALSCKM
AVEYDRFIESGKKWFCHVDDDNYVNLRALLRLLASYPHTQDVYIGKPSLDRPIQATERIS
EHRVRPVHFWFATGGAGFCISRGLALKMGPWASGGHFMSTAERIRLPDDCTIGYIVEALL
GVPLIRSGLFHSHLENLQQVPTTELHEQVTLSYGMFENKRNAVHIKGPFSVEADPSRFRS
IHCHLYPDTPWCPRTAIL
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgctccagcgctgcggccggcgcctactgctggcgctggtgggtgcgctgctggcttgt
ctcctggtgctcaccgccgacccgccgccaactccggtgcccgctgagcgcggaaggcgc
gcgctgcgtagcctggcgggctcctctggggcggctccgggtccagggtccagggcggcc
gtggatcccggagtcctcgtccgcgaggtgcacagcctttccgagtacttcagtctactc
acccgcgcgcgcagagacgccgatccaccgcccggggtcgcttctcgccagggcgacggc
catccgcgtccccccgccgaggttctgtcccctcgcgatgtcttcatcgccgtcaagacc
accagaaagtttcaccgcgcgcggcttgacctgctgttcgagacctggatctcgcgccac
aaggagatgacattcatcttcacggacggggaggatgaagctttggccaagcacacaggc
aatgtggtactcaccaactgctctgcggcccacagccgccaggcgctgtcttgcaagatg
gctgtggagtacgaccgtttcattgagtcggggaagaagtggttctgccacgtggacgat
gacaactacgtcaacctccgggcactgctgcggctgctggccagctatccccacacccaa
gacgtgtacatcggcaagcccagcctggacagacccatccaggccacggagcggatcagc
gagcacagagtgagacctgtccacttttggtttgccaccggaggagctggcttctgcatt
agccgaggactggccctaaagatgggcccatgggccagtgggggacacttcatgagcaca
gcagagcgcatccgcctcccggatgattgcaccattggctacattgtggaggctctgctg
ggcgtgcccctcatccggagtggcctcttccactcgcacctggagaacctgcagcaggtg
cccaccaccgagctccatgaacaggtgaccctgagctatggcatgtttgaaaacaagcgg
aacgccgtgcacatcaagggacccttctcagtggaggctgacccttccaggttccgctct
atccactgccatctgtacccggacacaccctggtgtccccgcactgccatcctctag
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integrated database retrieval system