Rattus norvegicus (rat): 171046
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Entry
171046 CDS
T01003
Symbol
Tcf3
Name
(RefSeq) transcription factor E2-alpha isoform a
KO
K09063
transcription factor E2-alpha
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04550
Signaling pathways regulating pluripotency of stem cells
rno05166
Human T-cell leukemia virus 1 infection
rno05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
171046 (Tcf3)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
171046 (Tcf3)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
171046 (Tcf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rno03000
]
171046 (Tcf3)
Transcription factors [BR:
rno03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Ubiquitous (class A) factors
171046 (Tcf3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
Response_reg_2
Motif
Other DBs
NCBI-GeneID:
171046
NCBI-ProteinID:
NP_598208
RGD:
620914
Ensembl:
ENSRNOG00000051499
UniProt:
P21677
Q68G29
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All DBs
Position
7:9931251..9952994
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AA seq
649 aa
AA seq
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MMNQSQRMAPVGSDKELSDLLDFSMMFPLPVANGKGRPASLAGTQFAGSGLEDRPSSGSW
GNSEQNSSSFDPSRAYSEGAHFSDSHSSLPPSTFLGAGLGGKGSERNAYATFGRDTSVGT
LSQAGFLPGELGLSSPGPLSPSGVKSSSQYYTSFPSNPRRRAADGGLDTQPKKVRKVPPG
LPSSVYPSSSGDNYSRDATAYPSAKTPSSAYPSPFYVADGSLHPSAELWSPPGQVGFGPM
LGDGSAPLPLAPGSSSVSSGAFGGLQQQDRMGYQLHGSEVNGTLPAVSSFSAAPGTYSGT
SGHTPPVSGADSLLGTRGTTASSSGDALGKALASIYSPDHSSNNFSPSPSTPVGSPQGLP
GTSQWPRAGAPSALSPNYDAGLHGLSKMEDRLDEAIHVLRSHAVGTASELHGLLPGHSTL
TTSFAGPMSLGGRHAGLVSGSHPEDGLTSGASLLHNHASLPSQPSSLPDLSQRPPDSFSG
LGRAGVTAGASEIKREEKEDEEVTSVADAEEDKKDLKVPRTRTSPDEDEDDLLPPEQKAE
REKERRVANNARERLRVRDINEAFKELGRMCQLHLSTEKPQTKLLILHQAVAVILSLEQQ
VRERNLNPKAACLKRREEEKVSGVVGDPQLALSAAHPGLGEAHNPAGHL
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaccagtctcagagaatggcacctgttggctcggacaaagaactgagtgacctc
ctggacttcagtatgatgttcccgctacctgtggccaatggcaagggccggcccgcctcc
ctagctggaacccagttcgcaggctcaggactggaggaccgacccagctcagggtcctgg
ggcaacagtgaacagaacagttcttcctttgaccctagccgggcatacagcgaaggtgcc
cacttcagtgactcccacagcagcctgccgccttccacgttcctaggagctgggcttgga
ggcaagggcagtgaacggaatgcctatgccaccttcgggagagacaccagtgttggcacc
ctgagtcaggctggcttcctaccaggtgagctgggcctcagcagtcccgggccactgtcc
ccatcaggcgtcaagagcagctcccagtattacacctcattccccagcaaccctcggcgg
agagctgcagatggtggcctggatactcagcccaagaaggtccggaaggttccgcctggt
cttccttcctcggtatatccatccagctcaggtgataactacagcagggacgccacagcc
tacccctccgccaagacccccagcagcgcttacccctcccccttctacgtggcagacggc
agcctgcacccctcagcggagctctggagtccccctggccaggtgggctttgggcccatg
ctaggtgatggctcggcccccctgccgcttgcaccgggcagcagttccgtgagcagtggt
gcctttgggggcctccagcagcaggatcgcatgggctaccagctgcatgggtctgaggtc
aatggcacgctcccagctgtatccagcttctcagctgcccctggcacttacagtgggact
tctggccacacgccacccgtgagcggggccgacagcctcttaggcacccgagggactaca
gccagcagctcaggggatgcccttgggaaggcactggcctccatctactccccggatcac
tccagcaataatttctcgcccagcccctcaacgcctgtgggttcaccccagggcctgcca
gggacatcacagtggccccgggcaggagcgcccagtgccttatcccccaactacgatgca
ggtctccatggcctgagtaaaatggaagatcgcttggacgaggccatccacgtcctccgc
agtcacgctgtcggcactgcaagcgagctccatggactgctgcctggccacagcacgttg
accacaagctttgcgggccccatgtcactgggcgggcggcatgcaggcctggtcagcgga
agccaccctgaggatggcctcacaagtggtgccagtcttttgcataaccatgccagcctt
cccagccagcccagctccctccctgacctctcacagaggccacccgactcctttagtgga
ctcgggagggcaggcgtgactgcaggcgccagtgagatcaagcgggaggagaaagaggac
gaggaggtcacatcagtggcagacgctgaggaagacaagaaggacctgaaggtcccacgc
acacgtaccagcccagacgaggacgaggacgaccttctccccccagagcagaaggccgag
cgggagaaggagcgccgggtggccaataacgcccgagagcgcctgcgtgtccgcgacatc
aatgaggcctttaaggagctcggccgcatgtgccagctgcacctcagcactgagaagccg
cagaccaaactgctcatcctgcaccaggccgtggccgtcatcctcagcctggagcagcag
gtgcgagaacgcaacctgaaccccaaagcagcctgcttgaagcggcgggaggaggagaag
gtatctggcgtggtcggggatccgcagctggcgctgtcagccgcccacccgggcctgggt
gaggcccacaatccagctgggcacctgtga
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