Rattus norvegicus (rat): 171143
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Entry
171143 CDS
T01003
Symbol
Trpm4
Name
(RefSeq) transient receptor potential cation channel subfamily M member 4
KO
K04979
transient receptor potential cation channel subfamily M member 4
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04911
Insulin secretion
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09150 Organismal Systems
09152 Endocrine system
04911 Insulin secretion
171143 (Trpm4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rno04040
]
171143 (Trpm4)
Ion channels [BR:
rno04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
171143 (Trpm4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
Csm1_N
Motif
Other DBs
NCBI-GeneID:
171143
NCBI-ProteinID:
NP_001129701
RGD:
620244
Ensembl:
ENSRNOG00000020714
UniProt:
Q9ESQ5
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All DBs
Position
1:complement(104918462..104949453)
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AA seq
1208 aa
AA seq
DB search
MVGQEKEQSWIPKIFRKKVCTTFIVDLHDDAGGTLCQCGQPRDAHPSVAVEDAFGAAVVT
EWNSDEHTTEKPTDAYGDLDFTYSGRKSSNFLRLSDRTDPATVYSLVTRSWGFRAPNLVV
SVLGGSEGPVLQTWLQDLLRRGLVRAAQSTGAWIVTGGLHTGIGRHVGVAVRDHQTASTG
GSKVVAMGVAPWGVVRNRDMLINPKGSFPARYRWRGDPEDGVEFPLDYNYSAFFLVDDGT
YGRMGGENRFRLRFESYVAQQKTGVGGTGIDIPVLLLLIEGDEKMLKRIEDATQAQLPCL
LVAGSGGAADCLVETLEDTLAPGSGGLRRGEARDRIRRYFPKGDPEVLQAQVERIMTRKE
LLTVYSSEDGSEEFETIVLRALVKACGSSEASAYLDELRLAVAWNRVDIAQSELFRGDIQ
WRSFHLEASLMDALLNDRPEFVRLLISHGLSLGHFLTPVRLAQLYSAVSPNSLIRNLLDQ
ASHASSSKSPPANGAAELRPPNVGQVLRTLLGETCAPRYPARNTRHSLLGQDHRENDSLL
MDWANMQQDASFEQAPWSDLLIWALLLNRAQMAIYFWEKGSNSVASALGACLLLRVMARL
EWEAEEAARRKDLAAKFESMSVDLFGECYHNSEYRAARLLLRRCPLWGEATCLQLAMQAD
ARAFFAQDGVQSLLTQKWWGEMDSTNPIWALLLTFFCPPLIYTNLILFRKSEEEPTQKDL
DFDMDSSMNGAGPLGPAEPSAKVALERRRRRRPGHTLCCGGCSKRWSYFWGAPVTAFLGN
VVSYLLFLLLFAHVLLVDFQPTKPGVFELLLYFWAFTLLCEELRQGLGGGWGTLANGGPG
PGKAPLRHRLHLYLLDTWNQCDLLALTCFLLGVGCRLTPGLFDLGRTVLCLDFMIFTLRL
LHIFTVNKQLGPKIVIVSKMMKDVFFFLFFLCVWLVAYGVATEGILRPQDRSLPSILRRV
FYRPYLQIFGQIPQEEMDVALMNPSNCSAERGSWAHPEGPVAGSCVSQYANWLVVLLLIV
FLLVANILLLNLLIAMFSYTFNKVHGNSDLYWKAQRYSLIREFHSRPALAPPLIIISHLR
LLFKWLRRCHRTNLPASPVFEHFRVCLSKEAERTLLTWESVHKENFLLAQARDKRDSDSE
RLKRTSQKVDTALKQLGQIREYDRRLRGLEREVQHCSRVLTWMAEALSHSALLPPGGPPP
PSPTGSKD
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atggtggggcaggagaaagagcagagttggatccctaagatcttcaggaagaaggtgtgc
acgacgttcatagtggacctccacgatgatgcgggagggaccttgtgccagtgtgggcaa
cctcgggatgcccacccttctgtggctgtggaggatgcctttggggcagccgtagttacc
gagtggaacagtgatgagcacaccacggagaagcccacagatgcctacggggacctggac
ttcacatactctggccgaaagtccagcaacttcctccggctgtctgatcgcacggatccg
gccactgtgtacagtctcgtcacccgctcttggggctttcgtgctccaaacttggtggtg
tcagtgctgggggggtcggagggccccgtgctacagacctggctgcaggaccttctgcgt
cgtgggctggtgcgagcagcccagagcacaggggcctggatcgtcactgggggactgcac
acaggcattggtcggcatgtgggtgtggctgtgagggaccaccagacggccagcaccggg
ggcagcaaggtggtggccatgggtgtggccccctggggagtggtccggaacagagacatg
ctgatcaaccccaagggctcattccctgcaagataccggtggcgtggtgaccctgaggac
ggagttgagttccccctggactataactattctgctttcttcttggtggatgatggtacc
tatggccgcatgggtggtgagaaccgcttccgccttcggtttgagtcctatgtggctcag
cagaagaccggagtgggagggactggaattgacatccctgtactccttcttctcatcgaa
ggcgatgagaagatgttaaagcggatagaggatgccacccaggctcagctcccctgcctc
ttggtggctggctctgggggtgctgcagactgcctggtggagaccctggaagatactctg
gccccagggagtgggggactcaggcgaggtgaagcccgggatcgaattagacgttacttc
cctaaaggagaccccgaggtcctgcaggcccaggtagagaggatcatgacccgaaaggag
ctgctgacagtctattcatcagaggacggctccgaggagtttgagactatcgttttgagg
gctcttgtgaaagcctgtgggagctccgaggcctcggcttacctggatgaactgcgtttg
gctgtggcttggaaccgcgtggacatcgcccaaagtgaacttttccgtggggacatccag
tggcggtccttccacctggaggcctctctcatggacgctctgctgaatgaccggcctgag
tttgtgcgcttgctcatctcccatggccttagtctgggacacttcctgacccccgtgcgc
ctggcccagctgtacagcgcagtgtcccccaactcgctgatccgcaatcttctggaccag
gcgtcccacgctagtagcagcaaatctccacctgcaaatggagctgcagagctccggcct
cctaatgtggggcaagttctgaggactctgttgggagaaacgtgtgcaccgcggtacccc
gccaggaacacccgacactccctgctgggccaggaccacagagagaatgactctctgctc
atggactgggccaacatgcaacaggatgcaagctttgaacaagccccctggagtgacctg
cttatctgggctctgttgttgaaccgagcccagatggccatttatttctgggagaagggc
tccaactcagtggcctctgctctcggggcttgtctcttactccgagtgatggctcgcctt
gagtgggaggctgaggaagctgcacggcggaaggaccttgctgccaagtttgaaagcatg
agcgtggacctctttggagagtgttaccacaacagtgaatatcgagcagcccgccttctt
ctgcgtcgctgtcccctctggggagaggccacctgtctccagcttgccatgcaggctgac
gcccgtgcgttctttgcccaggatggagtacagtctctgctgacacagaagtggtggggg
gagatggacagcacgaaccctatctgggccctgcttctcaccttcttctgcccgcctctc
atctacaccaacctcatcctcttcaggaagtcagaggaggagcccacacagaaggatctt
gacttcgatatggacagcagcatgaatggagcaggtcctcttgggcctgcggagccctca
gcaaaggtggcccttgagaggcggcggcggcggcggccaggacataccctctgctgtggc
gggtgctccaagcgctggtcgtacttttggggcgccccagtgaccgccttcctgggtaac
gtggtcagttacctgctgttcctgctgctgtttgcacacgtgttgctggtggatttccag
cctacaaagccgggcgtcttcgagctgctgctgtacttctgggccttcacgctgctatgc
gaggagctgcgccagggcctgggcggtggctggggtaccctggccaacgggggacctggt
cctggcaaagctcccctgcgccatcgtctgcacctctacctcttggatacttggaaccag
tgcgacttgctggcactcacctgcttcctgctgggcgttggctgcaggctgactcctggc
ctgtttgacttgggacgcacagtcctctgtcttgacttcatgatcttcacactgcgcctg
ctgcacatcttcacggtgaacaagcagctggggcccaagattgtcatcgtgagcaagatg
atgaaggatgtattctttttcctcttcttcctctgcgtgtggcttgtagcttatggggtg
gccacagaggggatcctgaggccccaggaccgcagtctaccgagcatcctgcgcagggtc
ttctaccgtccgtatctgcagatcttcggacaaattccccaggaggaaatggatgtggcc
ctcatgaatcccagtaactgctctgccgagcggggctcctgggctcacccggaggggccg
gtcgcaggctcctgtgtgtcccagtatgccaactggctggtggtgttgctcctcatcgtc
ttcttgctggtggccaatatcctgctgctcaatctgctcatcgccatgttcagctacacc
ttcaacaaagtgcatggcaacagcgacctctactggaaggcgcagcgctacagcctcatc
cgggaattccattcgcggcctgccctggccccacccctcatcatcatctctcacctgcgt
ctcctcttcaagtggctgcgcaggtgtcataggactaacttgcccgcctccccagtcttc
gagcacttccgtgtctgtctctctaaggaagcagagaggacgctgctgacttgggagtct
gtgcacaaagagaacttcctattggcacaagctcgtgacaagcgagacagcgactcggag
cgtctgaaacgcacgtcccagaaggtggacactgcactgaagcagctgggacagatcaga
gagtatgaccggcgtctgagggggctggagagagaggtccaacactgttctcgagtcctg
acttggatggctgaggcccttagccactctgccttactgcctccaggggggccaccccct
ccaagccccactgggtccaaagactga
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integrated database retrieval system
