Rattus norvegicus (rat): 24811
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Entry
24811 CDS
T01003
Symbol
Tap1
Name
(RefSeq) antigen peptide transporter 1 precursor
KO
K05653
ATP-binding cassette, subfamily B (MDR/TAP), member 2 [EC:
7.4.2.14
]
Organism
rno
Rattus norvegicus (rat)
Pathway
rno02010
ABC transporters
rno04145
Phagosome
rno04612
Antigen processing and presentation
rno05163
Human cytomegalovirus infection
rno05168
Herpes simplex virus 1 infection
rno05169
Epstein-Barr virus infection
rno05170
Human immunodeficiency virus 1 infection
rno05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
24811 (Tap1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
24811 (Tap1)
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
24811 (Tap1)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
24811 (Tap1)
05168 Herpes simplex virus 1 infection
24811 (Tap1)
05163 Human cytomegalovirus infection
24811 (Tap1)
05169 Epstein-Barr virus infection
24811 (Tap1)
09163 Immune disease
05340 Primary immunodeficiency
24811 (Tap1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rno02000
]
24811 (Tap1)
Enzymes [BR:
rno01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
24811 (Tap1)
Transporters [BR:
rno02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
24811 (Tap1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
ABC_ATPase
AAA_22
AAA_29
AAA_16
AAA_23
AAA_30
AAA_15
Zeta_toxin
SRP54
AAA_25
AAA_18
AAA_33
Motif
Other DBs
NCBI-GeneID:
24811
NCBI-ProteinID:
NP_114444
RGD:
3817
Ensembl:
ENSRNOG00000000457
Vega:
OTTRNOG00000001670
UniProt:
P97561
P97949
F7EQP4
LinkDB
All DBs
Position
20:complement(4658171..4668543)
Genome browser
AA seq
725 aa
AA seq
DB search
MAAHAWPTAALLLLLVDWLLLRPVLPGIFSLLVPEVPLLRVWAVGLSRWAILGLGVRGVL
GVTAGARGWLAALQPLVAALGLALPGLASFRKLSAWGALREGDNAGLLHWNSRLDAFVLS
YVAALPAAALWHKLGGFWAPSGHKGAGDMLCRMLGFLDSKKGRLHLVLVLLILSCLGEMA
IPFFTGRITDWILQDKTAPSFARNMWLMCILTVASTALEFAGDGIYNITMGHMHSRVHGE
VFRAVLHQETGFFLKNPTGSITSRVTEDTSNVCESISDKLNLFLWYLGRGLCLLAFMIWG
SFYLTVVTLLSLPLLFLLPRRLGKVYQSLAVKVQESLAKSTQVALEALSAMPTVRSFANE
EGEAQKFRQKLEEMKPLNKKEALAYVTEVWTMSVSGMLLKVGILYLGGQLVVRGAVSSGN
LVSFVLYQLQFTRAVEVLLSIYPSMQKSVGASEKIFEYLDRTPCSPLSGSLAPLNMKGLV
KFQDVSFAYPNHPNVQVLQGLTFTLYPGKVTALVGPNGSGKSTVAALLQNLYQPTGGKVL
LDGELLVQYDHHYLHTQVAAVGQEPLLFGRSFRENIAYGLTRTPTMEEITAVAMESGAHD
FISGFPQGYDTEVGETGNQLSGGQRQAVALARALIRKPRLLILDDATSALDAGNQLRVQR
LLYESPEWASRTVLLITQQLSLAERAHHILFLKEGSVCEQGTHLQLMERGGCYRSMVEAL
AAPSD
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcacgcctggccgacggccgccttgctgctgctgctggtggactggctgctg
ctgcggcccgtgctcccgggaatcttctccctgttggttcccgaggtgccgctgctccgg
gtctgggccgtgggcttgagtcgctgggctatcctgggactaggggtccgcggggtcctc
ggggtcaccgcgggagcccgtggctggctggctgctttgcagccgctggtggcggcgctg
ggtttggccctgcctggacttgcctcgttccgaaagctgtccgcctggggagcactccgg
gagggtgacaacgctggactgctccactggaacagtcgcttagatgccttcgttctcagt
tatgtggccgcattgcccgcagctgccctgtggcacaagttggggggcttctgggcgccc
agtggccacaagggcgctggagacatgctgtgtcggatgctaggcttcctggactccaag
aaggggcgtctccacctggttctggttctcttgatcctctcctgccttggggaaatggcc
attcccttcttcacaggccgcatcactgactggatccttcaggataagacagcccccagc
ttcgcccgcaacatgtggctcatgtgtattcttaccgtagccagtacagcgctggagttt
gcaggagatggaatctacaacatcaccatgggccacatgcacagccgcgtgcatggagag
gtgtttcgggccgtccttcaccaggagacaggatttttcctgaagaacccaacaggttcc
atcacatctcgggtgactgaggacacctccaacgtgtgcgagtccattagtgacaagctg
aacctgttcctgtggtacctggggcgaggcctgtgtctcctggcgttcatgatttggggg
tcattctacctcactgtggtcaccctgctcagcctgcctctgcttttccttctgcccagg
aggctggggaaagtgtaccagtcactggcagtgaaggtgcaggagtctctagcaaagtcc
acgcaggtggccctcgaggccctgtcggcgatgcctaccgtacggagctttgccaacgag
gagggagaggcccagaagtttaggcagaagttggaagaaatgaagccgctaaacaagaaa
gaggccctggcttacgtcaccgaagtctggaccatgagtgtctcgggaatgctgctgaag
gtgggaattctgtacctcggtgggcagctggtggtcagaggggctgtcagcagcggcaac
ctcgtctcctttgttctctaccagcttcagttcaccagggccgtggaggtcctgctctcc
atctatccctccatgcagaagtccgtgggcgcctcggagaaaatattcgaatacctggac
cggactccctgctctccgctcagtggctcactggcacctttaaacatgaaaggcctcgtc
aagttccaagatgtctcctttgcctacccaaaccatcccaacgtccaggtgcttcagggg
ctgacttttacgctgtatcccgggaaggtgactgccttggtgggacccaatgggtcaggg
aagagcaccgtggccgccctgctgcagaacctgtaccagcccaccgggggcaaggtgctc
ctggatggcgagctcctggtccagtatgatcaccactacctgcacacgcaggtggccgca
gtgggacaagagccactgctatttggaagaagttttcgggaaaatattgcctatggcctg
acgcggactccaaccatggaggaaatcacagctgtggccatggagtccggagcccacgat
ttcatctctggattccctcagggctatgacacagaggtaggtgaaactgggaaccagctg
tcaggaggtcagcgacaggcggtggccttggctcgagccttgatccggaagccacgcctg
cttatcttggacgatgccaccagtgccctggatgctggcaaccagctacgggtccagcgg
ctcctgtatgagagccccgagtgggcctctcggacggttcttctgatcacccagcagctc
agcctggcagagcgggcccaccacatcctcttcctcaaagaaggctctgtctgcgagcag
ggcacccacctgcagctcatggagagaggagggtgttaccggtccatggtggaggctctt
gcggctccttcagactga
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