Rattus norvegicus (rat): 288378
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Entry
288378 CDS
T01003
Symbol
Clec4m
Name
(RefSeq) CD209b antigen
KO
K06563
C-type lectin domain family 4 member L/M
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03260
Virion - Human immunodeficiency virus
rno03264
Virion - Flavivirus and Alphavirus
rno03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
rno03273
Virion - Lassa virus and SFTS virus
rno04145
Phagosome
rno04517
IgSF CAM signaling
rno04625
C-type lectin receptor signaling pathway
rno05152
Tuberculosis
rno05162
Measles
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03260 Virion - Human immunodeficiency virus
288378 (Clec4m)
03264 Virion - Flavivirus and Alphavirus
288378 (Clec4m)
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
288378 (Clec4m)
03273 Virion - Lassa virus and SFTS virus
288378 (Clec4m)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
288378 (Clec4m)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
288378 (Clec4m)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
288378 (Clec4m)
09160 Human Diseases
09172 Infectious disease: viral
05162 Measles
288378 (Clec4m)
09171 Infectious disease: bacterial
05152 Tuberculosis
288378 (Clec4m)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
288378 (Clec4m)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
rno04054
]
288378 (Clec4m)
04515 Cell adhesion molecules [BR:
rno04515
]
288378 (Clec4m)
04090 CD molecules [BR:
rno04090
]
288378 (Clec4m)
04091 Lectins [BR:
rno04091
]
288378 (Clec4m)
Membrane trafficking [BR:
rno04131
]
Endocytosis
Phagocytosis
C-lectin receptors
288378 (Clec4m)
Pattern recognition receptors [BR:
rno04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
288378 (Clec4m)
Cell adhesion molecules [BR:
rno04515
]
Lectins
Selectins and C-type lectins
288378 (Clec4m)
CD molecules [BR:
rno04090
]
Proteins
288378 (Clec4m)
Lectins [BR:
rno04091
]
C-Type lectins
Asialoglycoprotein and DC receptors
288378 (Clec4m)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lectin_C
GlnE
IIGP
FUT8_N_cat
PAP_NTPase
DUF5063
HERV-K_REC
Motif
Other DBs
NCBI-GeneID:
288378
NCBI-ProteinID:
NP_001163868
RGD:
1561466
Ensembl:
ENSRNOG00000029881
UniProt:
Q5BK08
LinkDB
All DBs
Position
12:complement(6713795..6722414)
Genome browser
AA seq
319 aa
AA seq
DB search
MQPLDSMEDGEMEVSGSRYSIKSSRLRPNSGIKSLAGCLGHNQAPLVLQLLSFLFLAGLL
LIILFQVFKTTNTQWQEEPKQEKILEELNQLTDELMSRIPISQGQNESMQEKISEQLTQL
KVELLSRIPVFQVQNESMQEKISEQLTQLKAELLSKIPSLQVQDESKQEKIYQQLVQMKT
ELLRLCRLCPWDWTFLLGNCYFLSKSQRNWNDAVRACKEEKAQLVIINSDEEQTFLQLTS
KAKGPTWMGLSDLKNEATWLWVDGSTLSSRFQKYWNRGEPNNIGEEDCVEFAGDGWNDSK
CELKKFWIFKKSATACTEG
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgcagcctcttgattccatggaggacggcgagatggaggtcagtggcagcaggtattct
attaaaagctccagactacgaccaaattctggaatcaagagtttggcaggatgcctggga
cacaaccaagcccccttggtcctgcagctgctctctttcctgttcttggctgggctcctg
ctgatcattcttttccaagtcttcaagaccacaaatacccagtggcaggaggaacccaag
caagagaagatccttgaggaactgaaccagctgacagacgaacttatgtccaggatcccc
atctcccaggggcagaatgagtccatgcaggagaagatctctgagcaactgactcagctg
aaggttgaactcctatccaggatccccgtcttccaagtgcagaatgaatccatgcaagag
aagatctctgagcaactgacacagctgaaggctgaactcctttccaagatccccagcctc
caggtacaggatgagtctaagcaggagaagatctaccaacagctggtacagatgaagact
gaactcctccgcctgtgtcgactctgcccctgggactggacattcctcctaggaaactgt
tacttcttatccaagtcccaacggaactggaatgatgccgtcagagcttgcaaagaagag
aaggctcaattagtcatcatcaatagtgatgaagagcagaccttcctacagctgacttct
aaggctaaaggaccaacctggatggggctgtcagacctgaagaatgaagccacatggctc
tgggtagatggttctactctgtcatccagattccagaaatattggaatagaggggagccc
aacaacatcggtgaagaagactgtgtagaatttgctggggatggctggaatgactccaaa
tgtgaactcaaaaagttctggattttcaagaagtctgcgaccgcatgcactgaaggctag
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