Rattus norvegicus (rat): 291912
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Entry
291912 CDS
T01003
Symbol
Nod2
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 2
KO
K10165
nucleotide-binding oligomerization domain-containing protein 2
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04621
NOD-like receptor signaling pathway
rno04668
TNF signaling pathway
rno05152
Tuberculosis
rno05321
Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09132 Signal transduction
04668 TNF signaling pathway
291912 (Nod2)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
291912 (Nod2)
09160 Human Diseases
09171 Infectious disease: bacterial
05152 Tuberculosis
291912 (Nod2)
09163 Immune disease
05321 Inflammatory bowel disease
291912 (Nod2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
rno04054
]
291912 (Nod2)
Pattern recognition receptors [BR:
rno04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
291912 (Nod2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
CARD
NLRC4_HD2
WHD_NOD2
LRR_4
AAA_29
AAA_22
nSTAND_NTPase5
AAA_16
AAA_25
AAA_30
ABC_tran
NB-ARC
AAA_18
G-alpha
Motif
Other DBs
NCBI-GeneID:
291912
NCBI-ProteinID:
NP_001401840
RGD:
1306368
Ensembl:
ENSRNOG00000014124
LinkDB
All DBs
Position
19:complement(34555832..34596281)
Genome browser
AA seq
1012 aa
AA seq
DB search
MCSQEDFQAQRSQLVALLVSGSLEGFESILDWLLSWDVLSREDYEGLSLPGQPLSHSARR
LLDTVCNKGVWGCQKLFEAVQEAQANSHTFELQGCWDVHSLHPTRDLQSHRPAIVRRLCS
HVEAILELARDEGFLSQYECEEIRLPIFTSSQRARRLLDLAAVKANGLAAFLLQHVRKLP
ASLSLPYEAAECQKFTAKLRTMVSAQSRFLSTYDGSENLCLEDIYTENTLELRTEVGTAG
ALQKSPATLGLEELFGTHGHLNKDADTILVVGEAGSGKSTLLQRLHLLWASGQNFREFLF
IFPFSCRQLQCMTKPLSLRTLLFEHCCWPDVGQDDVFQFLLDHPDRVLLTFDGLDEFKFR
FTDRERHCSPLDPTSVQTLLFNLLQGNLLKNACKVLTSRPDAVSALLRKFVRTECHLKGF
SEEGIKLYLRKHHREPGVADRLIHLIQATSALHGLCHLPVFSWMVSRCHRELLLQNRGFP
TTSTDMYLLILQHFLLHASPPDSFPLGLGPGLLQSRLSTLLHLGHLALQGLAMSCYVFSA
QQLQAAQVDSEDISLGFLVRAQSVVPGSKAPLEFLHITFQCFFAAFYLAVSADTSAASLK
HLFSCGRPGNSLLLRLLPNLCIQGSRVKGGQAALLQKAEPHNLQITAAFLAGLLSQQHRD
LLAACQVPERVLLQRQARARSCLAHSLREHFHSIPPAVPGETKSMHAMPGFIWLIRSLYE
MQEVQLAREAVRRLDIGHLKLTFCRVGPAECAALAFVLQHLQRPVALQLDHNSVGDVGVE
QLLPCLGVCTALYLRDNNISDRGARTLVECALRCEQLQKLALFNNKLTDGCASSVAKLLA
HKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLQFLGFWGNSVGDKGSQALAEVVADHQR
LKWLSLVGNNIGSVGAHALALMLEKNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFL
KLSNNGITYRGAEALLQALNRNSTVLEVWLRGNTFSPEEAQTLSSSDARLLL
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgtgctcacaggaagacttccaggcccagaggagccagctggtggcactgttggtctca
gggtccttggagggctttgagagcatcttagactggctgctgtcttgggatgtgctctcc
agggaggactatgagggcctcagcctccctgggcaacctctctcccattctgccaggcgt
ctgctggacacagtctgcaacaagggtgtttggggctgtcagaagctcttcgaagctgtg
caggaggcccaggccaacagtcacacctttgaactgcaagggtgctgggacgttcactcc
cttcatcccaccagagacctgcagagtcaccggccagcaattgtacggaggctctgcagc
catgtagaagccatattggagctggcaagggatgaggggtttctgagccagtacgaatgt
gaggagatcaggttgccaatcttcacatcatcccagagggcaagaagactgcttgatctc
gccgcagtgaaggcaaatggactggccgccttccttctacagcacgtcaggaaattacca
gcctcactgtctctgccttacgaggctgctgagtgtcagaagttcactgctaagctgagg
accatggtgtcagctcagtctcgcttcctcagtacttacgatgggtcggagaatctttgc
ctggaggatatctacacggagaacaccttagagctgcggacagaggtgggcacagcgggg
gccttgcagaagagccctgccaccctgggcctggaggaactctttggaacccacggccac
ctgaacaaagacgccgacactatactggtggtgggcgaagcgggcagcggcaagagcacc
cttctgcaacgtttgcacttgttgtgggcatcagggcagaacttccgagagttcctcttc
attttcccattcagctgccggcagctgcaatgcatgaccaaacctctgtccctgaggaca
ctgctctttgagcattgctgttggcctgatgtcggtcaggatgacgtcttccagttcctc
cttgaccatcctgaccgtgtcctgttaacctttgatggcttggatgagttcaagttccgg
ttcacagaccgggagcgccactgctctccgctcgaccccacgtcagtccagactctgctt
ttcaaccttcttcaggggaacctgctgaagaatgcctgcaaggtactgaccagccgtcca
gacgccgtgtcagcgctcctcagaaagttcgtccggacagagtgccaccttaagggcttc
tccgaagagggcatcaaactgtacctgagaaagcaccaccgggaacccggggtggcagac
cgcctcatccacctgatccaagctacctcagccctgcacggtttgtgccacctccctgtc
ttctcatggatggtgtccagatgtcaccgagagctgttgctacagaacaggggcttccca
acaaccagcacggacatgtacctcttgatcctacagcatttcctgctgcacgcctcccct
ccggactccttcccccttggtctgggacctggactcctccaaagccggctctccaccctc
ctgcaccttggccacctggctctccagggcctggccatgagctgctatgtgttctcagcc
cagcagctgcaggcagcacaggtggactctgaggatatttctcttggtttcctggtacgc
gcccaaagtgtggtgcccgggagcaaggcacccctggaattcttgcacattaccttccag
tgcttttttgccgcgttctacttggctgtcagtgctgacacatcggcggcctctctcaag
cacctcttcagctgcggccggccgggcaactcactgctgctaaggctgctgcccaacctg
tgtatccagggctccagagtcaagggcggccaagcagctctgctgcagaaggctgagccg
cacaacctgcagatcacagcagccttcctagcgggtctgttgtcccagcagcatcgggac
ctgttggctgcatgccaggtccctgagagggtgctgctccagcgtcaggcccgtgcccgc
tcctgcctggcacacagcctccgggagcacttccattccatcccgccggccgtgcccggt
gagaccaagagcatgcatgctatgcccggcttcatttggctcatccggagcctgtacgag
atgcaggaggtgcagttggcccgggaggctgtccgtcgcttggacattgggcacctgaag
ttgacgttttgcagggtgggccctgcagagtgcgctgccctggcctttgtgctgcagcat
ctgcagcggcctgtggccctgcagttggaccacaactccgttggcgatgtcggagtggaa
cagctgctgccatgcctcggcgtctgcacagctctgtacttgcgagataacaacatctcc
gatcgaggtgcccgcacgctggttgagtgtgctcttcgctgtgaacagctgcagaagcta
gctctcttcaacaacaaactcactgatggctgtgcctcctccgtggccaagctccttgca
cacaagcagaacttcctatctctgagggtggggaacaatcacatcactgctgctggggct
gaggtgctggcccagggactcaagagcaacacctccctgcagttcctggggttctggggc
aacagtgtaggtgataagggctcccaagccctggctgaagttgtggctgatcaccagagg
ctaaagtggctcagcctggtaggaaacaacattggcagcgtgggtgcccacgccctagcc
ctgatgctggagaagaacaagtcactagaggagctctgcctagaggaaaaccatatctgt
gacgaaggggtgtattctcttgcagaaggactgaagagaaattcaactttgaaattcttg
aaactgtccaacaatggcattacctaccggggcgcagaagccctcctgcaggcccttaac
aggaacagcactgttctggaggtttggctccgagggaacacattctctccggaggaagcc
caaacactcagttccagtgatgccagactcctgctgtga
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