Rattus norvegicus (rat): 29211
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Entry
29211 CDS
T01003
Symbol
Sptbn2
Name
(RefSeq) spectrin beta chain, non-erythrocytic 2
KO
K23932
spectrin beta, non-erythrocytic 2
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04517
IgSF CAM signaling
rno04820
Cytoskeleton in muscle cells
rno05017
Spinocerebellar ataxia
rno05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
29211 (Sptbn2)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
29211 (Sptbn2)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
29211 (Sptbn2)
05022 Pathways of neurodegeneration - multiple diseases
29211 (Sptbn2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rno04812
]
29211 (Sptbn2)
Cytoskeleton proteins [BR:
rno04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
29211 (Sptbn2)
Intermediate filaments
Intermediate filament-binding proteins
29211 (Sptbn2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
Motif
Other DBs
NCBI-GeneID:
29211
NCBI-ProteinID:
NP_062040
RGD:
3751
Ensembl:
ENSRNOG00000058842
UniProt:
A0ABK0M5S7
A6HYY4
LinkDB
All DBs
Position
1:211432373..211473016
Genome browser
AA seq
2388 aa
AA seq
DB search
MSSTLSPTDFDSLEIQGQYSDINNRWDLPDSDWDNDSSSARLFERSRIKALADEREAVQK
KTFTKWVNSHLARVTCRVGDLYSDLRDGRNLLRLLEVLSGETLPKPTKGRMRIHCLENVD
KALQFLKEQKVHLENMGSHDIVDGNHRLTLGLVWTIILRFQIQDISVETEDNKEKKSAKD
ALLLWCQMKTAGYPNVNVHNFTTSWRDGLAFNAIVHKHRPDLLDFESLKKCNAHYNLQNA
FNLAEKELGLTKLLDPEDVNVDQPDEKSIITYVATYYHYFSKMKALAVEGKRIGKVLDHA
MEAEHLVEKYESLASELLQWIEQTIVTLNDRQLANSLSGVQNQLQSFNSYRTVEKPPKFT
EKGNLEVLLFTIQSKLRANNQKVYTPREGRLISDINKAWERLEKAEHERELALRTELIRQ
EKLEQLAARFDRKAAMRETWLSENQRLVSQDNFGLELAAVEAAVRKHEAIETDIVAYSGR
VQAVDAVAAELAAEHYHDIKRIAARQNNVARLWDFLREMVAARRERLLLNLELQKVFQDL
LYLMDWMAEMKGRLQSQDLGKHLAGVEDLLQLHELVEADIAVQAERVRAVSASALRFCDP
GKEYRPCDPQLVSERVATLEQSYEALCELAATRRARLEESRRLWRFLWEVGEAEAWVREQ
QHLLASAETGRDLTGVLRLLNKHTALRGEMSGRLGPLKLTLEQGQQLVAEGHPGANQAST
RAAELQAQWERLEALAEERAQRLAQAASLYQFQADANDMEAWLVDALRLVSSPEVGHDEF
STQALARQHRALEEEIRAHRPTLDALREQAAALPPALSHTPEVQGRVPTLEQHYEELQAR
AGERARALEAALAFYTMLSEAGACGLWVEEKEQWLNGLALPERLEDLEVVQQRFETLEPE
MNALAARVTAVSDIAEQLLKASPPGKDRIIGTQEQLNQRWQQFRSLADGKKAALTSALSI
QNYHLECTETQAWMREKTKVIESTQDLGNDLAGVLALQRKLAGTERDLEAISARVGELTQ
EANALAAGHPAQAPAINTRLGEVQTGWEDLRATMRRREESLGEARRLQDFLRSLDDFQAW
LGRTQTAVASEEGPATLPEAEALLAQHAALRGEVERAQSEYSRLRTLGEEVTRDQADPQC
LFLRQRLEALGTGWEELGRMWESRQGRLAQAHGFQGFLRDARQAEGVLSSQEYVLSHTEM
PGTLQAADAAIKKLEDFMSTMDANGERIRGLLEAGRQLVSKGNIHAEKIQEKADSIEKRH
RKNQEAVQQLLGRLRDNREQQHFLQDCQELKLWIDEKMLTAQDVSYDEARNLHTKWQKHQ
AFMAELAANKDWLDKVDKEGRELTLEKPELKVLVSEKLEDLHRRWDELETTTQAKARSLF
DANRAELFAQSCSALESWLESLQAQLHSDDYGKDLTSVNILLKKQQMLEREMAVREKEVE
AIQAQAKALAQEDQSAGEVERTSRAVEEKFRALCQPMKDRCRRLQASREQHQFHRDVEDE
ILWVTERLPMASSLEHGKDLPSVQLLMKKNQTLQKEIQGHEPRIADLKERQRTLGTAAAG
PELAELQEMWKRLSHELELRGKRLEEALRAQQFYRDAAEAEAWMGEQELHMMGQEKAKDE
LSAQAEVKKHQVLEQALADYAQTIKQLAASSQDMIDHEHPESTRLTIRQAQVDKLYAGLK
ELAGERRERLQEHLRLCQLRRELDDLEQWIQEREVVAASHELGQDYEHVTMLRDKFREFS
RDTSTIGQERVDSANALANGLIAGGHAARATVAEWKDSLNEAWADLLELLDTRGQVLAAA
YELQRFLHGARQALARVQHKQQQLPDGTGRDLNAAEALQRRHCAYEHDIQALSTQVQQVQ
DDGLRLQKAYAGDKAEEIGRHMQAVAEAWAQLQGSSAARRQLLLDTTDKFRFFKAVRELM
LWMDGINLQMDAQERPRDVSSADLVIKNQQGIKAEIEARADRFSACIDMGQELLARNHYA
AEEISEKLSQLQSRRQETAEKWQEKMDWLQLVLEVLVFGRDAGMAEAWLCSQEPLVRSAE
LGCTVDEVESLIKRHEAFQKSAVAWEERFSALEKLTALEERENEQKRKREEEERRKQPPT
SEPMASQPEGSLVDGQRVLDTAWDGTQSKLPPSTQAPSINGVCTDTESSQPLLEQQRLEQ
SNVPEGPGSGTGDESSGPRGERQTLPRGPAPSPMPQSRSSESAHVATLPARGAELSAQEQ
MEGTLCRKQEMEAFNKKAANRSWQNVYCVLRRGSLGFYKDARAASAGVPYHGEVPVSLAR
AQGSVAFDYRKRKHVFKLGLQDGKEYLFQAKDEAEMSSWLRVVNAAIATASSASGEPEEP
VVPSASRGLTRAMTMPPVSQPEGSIVLRSKDGREREREKRFSFFKKNK
NT seq
7167 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcaccctgtcacccactgacttcgacagcttggagatccagggccagtacagt
gacatcaacaaccgctgggacctgcccgactcagattgggacaatgacagcagttcagcc
cgcctctttgagaggtccagaattaaggccctggcagatgagcgagaagccgtgcagaag
aaaaccttcaccaagtgggtgaactcccacctggcccgggtgacatgccgggtgggagac
ctgtacagcgacctgcgggacgggcgcaacctcctgaggctcctggaggtgctctcggga
gagaccctgccaaaacccaccaagggccggatgcggattcactgcctggagaatgtcgac
aaagcactgcagttcctgaaggagcagaaggtgcacctggaaaacatgggctcccacgac
attgtggatgggaaccaccgtctgacccttgggctagtgtggaccatcatcctccgattt
cagatccaagacatcagtgtggagacagaagacaacaaggagaagaagtcagccaaggat
gccctgctgctgtggtgccagatgaagactgcagggtatcccaatgtcaatgtgcacaac
tttaccaccagttggagagatgggctggcctttaatgccattgtgcacaaacaccggcca
gacctgttggattttgagtccctgaagaagtgtaacgcacactacaatctgcagaatgct
ttcaatctggctgaaaaggaacttggcctgacgaagctcctggatcctgaagatgtgaac
gtagaccaacccgatgagaagtccatcatcacctacgtggccacttactaccactacttc
tcgaagatgaaggccctggctgtggaaggcaaaaggattggcaaggtcctggaccatgcc
atggaggcagaacacctggtagagaaatatgagtccctggcctctgaactgctgcagtgg
atcgagcaaacgattgtgaccctcaatgaccgacagctggccaactccctgagtggcgtc
cagaaccagctgcagtctttcaattcctaccgcacggtggagaagccacccaagttcaca
gagaaagggaacttggaggtgttgctcttcaccatccagagtaagctgcgggccaacaac
cagaaagtctacacaccacgcgaaggccggctcatctcggacatcaacaaggcctgggag
cggctagagaaagccgaacatgagcgagagctggccctgcgcacggagctgatccgccag
gagaagctggagcaactggctgctcgcttcgaccgcaaggctgccatgcgggagacctgg
ctcagtgagaaccagcgcctcgtctcccaggacaactttggcctggagctggcagcagtg
gaggcagcagtgcggaagcatgaagccattgagacagacattgtggcctacagcggccgg
gtgcaagcggtggacgccgtagccgcagaactggccgctgagcactaccatgacattaag
cgcattgcggcgcggcagaacaacgtggcccggctctgggacttcttacgagagatggtg
gccgcccgccgtgagcggctccttctcaacctggagctgcagaaggtgtttcaggacctg
ctctacctcatggactggatggcagagatgaagggccggctgcagtctcaggacctaggc
aagcatctggctggagtggaagatctactgcaactacacgaactggtggaggcggacatt
gcagttcaggctgagagggtgcgagcggtcagcgcctctgccctgcgcttctgcgacccc
gggaaagagtatagaccatgtgacccacagctagtgtcagagagggtagccactctggag
cagagctatgaggccctgtgcgaattggcagcaactcgaagggcccgactggaagagtcc
cgtcgtctctggaggttcctctgggaagtgggtgaggccgaggcctgggttcgggagcag
cagcacctcctggcctcagctgagacaggccgggacctgactggtgtcctccgcctgctc
aataagcacacagccctacggggtgagatgagtggccgcctggggcccctgaagctcacc
ctggaacaaggtcagcagttagttgccgagggccaccctggagctaaccaagcctcaacc
cgtgcagcagagctccaggcccagtgggagcgactagaagccctggccgaggagcgagcc
cagcggctagcacaggctgccagcctctaccagttccaggcagatgccaatgacatggag
gcttggttggtggacgcactacgcctggtatctagccctgaggtagggcacgatgagttc
tccacgcaggccctggccaggcagcacagggcccttgaggaggagatccgagcccaccgg
cctacactggatgccttgagggagcaggctgcagccctgccacctgcactgagccacaca
cctgaggtacagggcagggtgcccactctggagcagcactatgaggagctgcaggcccgg
gcaggtgagcgtgcacgagccctggaagcagccctggcgttctataccatgctcagcgag
gccggggcttgtgggctctgggtagaggagaaggagcagtggctcaacgggctggcccta
cctgagcgcctggaggacctggaggtggtccaacagaggtttgagaccttagagcccgaa
atgaacgccctggctgcacgggttactgctgtcagtgacatagctgagcagttgctgaag
gccagtccaccaggcaaggaccgcatcattggcacccaggagcagctcaaccaaaggtgg
cagcagttcaggtccctggcagatggcaaaaaggcagctctgacatcagccctgagcatc
cagaattaccacctagagtgcacagagacccaggcctggatgagagaaaagaccaaggtc
attgagtctacccaggacctaggcaatgatctagctggtgtgctggccctgcagcggaag
ctggcaggcactgagagagatctggaagccatctctgcccgggtgggtgagctgacccaa
gaggcaaatgctttggctgctgggcacccagcccaagcccctgccatcaacacacggctt
ggagaggttcaaactggatgggaggatcttcgggcaaccatgaggcggagagaagagtcc
ctgggtgaggctcgacggctgcaagatttcctgcgcagcttggatgacttccaggcctgg
ctaggccgcacacagactgctgtagcctctgaggaaggaccagccacccttccagaggca
gaagccctcttagcccagcatgcagctctgcggggagaggtggagagagcccagagcgag
tacagccgcctcaggaccttgggcgaggaggtgaccagagaccaggctgatccccaatgc
ctcttcctcagacagaggctggaagcccttggaaccggctgggaggagctgggtcgcatg
tgggagagccggcaaggccgcttggcccaggcccatggcttccaggggtttttgagagat
gctcgccaggctgagggagttctcagcagccaggaatatgttctatctcacacggagatg
ccagggacactgcaggcggcggatgcagccattaaaaagctggaagacttcatgagcacc
atggacgccaatggagagcgcatccgtggactcctggaggctggccgtcagctggtgtcc
aagggcaatatccatgctgagaagatccaagagaaggcagactccatcgagaagaggcac
agaaagaaccaggaggccgtgcagcagcttctaggccgccttcgggacaaccgagagcag
cagcacttcttgcaagactgtcaggagctgaaactctggattgacgagaagatgctgaca
gctcaggatgtgtcctatgatgaggcacgcaacctgcacaccaagtggcaaaaacaccag
gcattcatggccgagctggcagccaacaaggactggctggacaaagtggacaaggaaggg
cgggagctgactcttgaaaagccagaactcaaagtcctagtgtcagagaagctggaggac
ctgcacaggcgctgggatgaactggagactaccacccaagccaaggcccgcagtcttttt
gatgctaaccgggcagagctatttgcccaaagctgttctgccctggagagctggctggag
agcctgcaggcccagctgcactcagatgactatggcaaggacctcaccagtgtcaacatt
ctgctaaagaagcaacagatgctggaacgagagatggctgtgagagagaaggaggtagag
gctatccaggcccaggcaaaagccctggcccaggaagaccaaagtgcaggagaggtggaa
aggacctccagagctgtggaggagaagttcagggccttgtgtcagcccatgaaggaccgc
tgccggcgcctgcaagcctcccgagagcagcaccagttccaccgggatgtggaggatgag
atactgtgggtgaccgagcggcttcccatggccagctctctggagcatggcaaggacttg
cccagcgtccagcttctcatgaagaaaaaccagactctgcagaaggagatccagggccat
gagccccggattgcagacctcaaagagagacagcgcactctgggaacagcagcagcgggt
ccagagctggctgagctccaggaaatgtggaaacgcctgagccatgagctggagcttcgg
ggtaaacgactggaggaggcccttcgagcccagcaattctatcgtgacgctgcagaggcc
gaggcttggatgggggagcaggagttacatatgatgggccaggaaaaggccaaggatgag
ctgagcgcccaggcagaagtgaagaagcatcaggtactagaacaagcccttgctgactat
gcccagaccatcaaacaactagcagccagcagtcaagatatgattgaccatgaacatcca
gagagcacaaggttaacaatacgccaagcccaggtggacaagctgtatgccggcctaaag
gagctggcaggagagcggcgtgagcgtctgcaggagcacctcaggctgtgccagctccgc
agagagctggatgacctggagcagtggatacaggagcgagaagtcgtggcagcctcccat
gaactgggccaggactatgagcatgtgactatgcttcgggacaaattccgagagttctcc
agggacaccagcaccattggccaagagcgtgtagacagtgccaatgccctggccaatggg
ctcattgctgggggccatgctgcacgggccaccgtggccgagtggaaggacagtctcaat
gaggcctgggctgacctgctggagctgctggacacaagaggtcaggtgctggctgctgct
tatgagctgcagcgcttcctgcatggggcccgccaagccctggcacgggtgcagcacaag
cagcagcagcttccagatgggacgggccgcgacctcaatgctgctgaggccctgcagcgc
cggcactgcgcctatgagcacgacatccaagccctcagcactcaggtccagcaggttcag
gacgatggcctcaggctacaaaaggcctatgctggagacaaggctgaggaaattggccgt
cacatgcaggcagtggctgaggcgtgggcccagctccagggaagttctgctgcccgtcgc
cagctgttactggataccacagacaaattccgattcttcaaggctgtccgggagttgatg
ctgtggatggatgggattaacctgcagatggatgcccaggagaggccccgggatgtgtcc
tctgcagatttagtcatcaaaaaccaacaaggcatcaaagcagagatagaggcaagagct
gacaggttctccgcctgcattgacatggggcaagagctgctggcccggaaccactatgcc
gctgaggagatctcagagaagctgtctcagctacagtcccggcgccaggagacagctgaa
aagtggcaggagaagatggactggctacagcttgttttggaggtgcttgtgtttgggaga
gatgcaggcatggcagaggcctggctatgcagtcaggagccattggtgcgaagtgcagaa
ctgggttgcactgtggatgaagtagagagcctcatcaagcggcatgaagccttccagaag
tcagcagtggcctgggaggagcgtttcagtgccctggagaagctcactgcgctggaagag
cgggagaatgagcagaaaaggaagagggaggaggaggaacgaaggaaacagccccctact
tcagagcccatggctagtcaaccggaagggagtctggtagatggccagagagttcttgac
actgcctgggatgggacccagtcaaaattgccaccatccacacaagcacccagcattaat
ggggtctgcacggacacggagtcctcacagcccctgttggaacagcaaagacttgaacag
agcaatgtcccagaagggcctggatctggcacaggagacgagtccagcgggccccgggga
gagaggcagaccctgccccggggccctgctccgtctccaatgccccagagcagatcgtct
gagtcagctcatgttgccaccctgcccgcacgaggtgctgagctctctgctcaggaacag
atggaagggacgctgtgccgcaaacaggagatggaagccttcaataagaaagctgccaac
aggtcctggcagaatgtgtactgtgtacttcggcgtggaagcctcggcttttacaaggat
gccagggcagctagtgcaggagtgccataccatggagaagtgcctgtcagtctggccagg
gcccagggcagtgtggcctttgattatcggaaacgcaaacatgtcttcaagctgggcttg
caggatgggaaagagtatctattccaggccaaggatgaggcagagatgagctcatggctg
agagtggtgaatgcagccattgccactgcgtcctcggcctctggagagccagaagagcca
gtggtgcccagtgccagccggggtctgaccagggccatgaccatgcccccagtgtcacag
cctgagggctccatcgtgcttcgcagcaaggatggcagagaaagagagcgagaaaaacga
ttcagcttctttaagaagaacaagtag
DBGET
integrated database retrieval system
