Rattus norvegicus (rat): 294273
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Entry
294273 CDS
T01003
Symbol
RT1-DMb
Name
(RefSeq) RT1 class II, DM beta precursor
KO
K06752
MHC class II antigen
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04145
Phagosome
rno04514
Cell adhesion molecules
rno04612
Antigen processing and presentation
rno04640
Hematopoietic cell lineage
rno04658
Th1 and Th2 cell differentiation
rno04659
Th17 cell differentiation
rno04672
Intestinal immune network for IgA production
rno04940
Type I diabetes mellitus
rno05140
Leishmaniasis
rno05145
Toxoplasmosis
rno05150
Staphylococcus aureus infection
rno05152
Tuberculosis
rno05164
Influenza A
rno05166
Human T-cell leukemia virus 1 infection
rno05168
Herpes simplex virus 1 infection
rno05169
Epstein-Barr virus infection
rno05310
Asthma
rno05320
Autoimmune thyroid disease
rno05321
Inflammatory bowel disease
rno05322
Systemic lupus erythematosus
rno05323
Rheumatoid arthritis
rno05330
Allograft rejection
rno05332
Graft-versus-host disease
rno05416
Viral myocarditis
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
294273 (RT1-DMb)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
294273 (RT1-DMb)
09150 Organismal Systems
09151 Immune system
04640 Hematopoietic cell lineage
294273 (RT1-DMb)
04612 Antigen processing and presentation
294273 (RT1-DMb)
04658 Th1 and Th2 cell differentiation
294273 (RT1-DMb)
04659 Th17 cell differentiation
294273 (RT1-DMb)
04672 Intestinal immune network for IgA production
294273 (RT1-DMb)
09160 Human Diseases
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
294273 (RT1-DMb)
05164 Influenza A
294273 (RT1-DMb)
05168 Herpes simplex virus 1 infection
294273 (RT1-DMb)
05169 Epstein-Barr virus infection
294273 (RT1-DMb)
09171 Infectious disease: bacterial
05150 Staphylococcus aureus infection
294273 (RT1-DMb)
05152 Tuberculosis
294273 (RT1-DMb)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
294273 (RT1-DMb)
05140 Leishmaniasis
294273 (RT1-DMb)
09163 Immune disease
05310 Asthma
294273 (RT1-DMb)
05322 Systemic lupus erythematosus
294273 (RT1-DMb)
05323 Rheumatoid arthritis
294273 (RT1-DMb)
05320 Autoimmune thyroid disease
294273 (RT1-DMb)
05321 Inflammatory bowel disease
294273 (RT1-DMb)
05330 Allograft rejection
294273 (RT1-DMb)
05332 Graft-versus-host disease
294273 (RT1-DMb)
09166 Cardiovascular disease
05416 Viral myocarditis
294273 (RT1-DMb)
09167 Endocrine and metabolic disease
04940 Type I diabetes mellitus
294273 (RT1-DMb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rno04147
]
294273 (RT1-DMb)
Exosome [BR:
rno04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
294273 (RT1-DMb)
Exosomal proteins of epithelial cells
294273 (RT1-DMb)
Exosomal proteins of breast milk
294273 (RT1-DMb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_II_beta
C1-set
Ig_2
Ig_3
I-set
C2-set_3
C2-set_2
Motif
Other DBs
NCBI-GeneID:
294273
NCBI-ProteinID:
NP_942035
RGD:
735096
Ensembl:
ENSRNOG00000049491
Vega:
OTTRNOG00000001668
UniProt:
Q6MGA7
A0A023ILP6
LinkDB
All DBs
Position
20:complement(4695009..4702560)
Genome browser
AA seq
261 aa
AA seq
DB search
MAALWPLLLALSLGCIGAGGFVAHVESTCLLDDEGTPMDFTYCISFNKDLLACWDPEEGQ
IVPCEYGVLFKLAEFISNILNKEEGLIQRLKNGLQDCSTHTQPFWNALTHRTRTPSVQVA
QTAPFNTREPVMLACYVWGFYPADVTVVWMKNGQLVTSHSNKEKTAQPNGDWTYQTVSYL
ALTPSYWDIYTCVVQHSGTPEPIRANWTPGLSPIQTVKVSVSAATLGLGFIIFCLGFFRW
RKSHSSSYTPLPGSTYPEGRP
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggctgcactatggccgctgctgctggccctgagtctgggttgtataggagcaggtggc
tttgtggctcatgtggaaagcacgtgcttgctggatgatgaagggaccccaatggacttc
acatactgtatttccttcaacaaagatctgctggcctgctgggatccagaggagggacaa
atagtcccctgtgaatatggggtcctgtttaagttggccgaattcatttcaaatatcctc
aacaaggaagaaggcctgatccagcgcttgaaaaatgggcttcaggactgttccacacac
acccagcccttctggaacgcgctgacccacagaaccagaacgccatctgtccaagtagcc
caaaccgctccttttaacacaagggagcctgtgatgctggcctgctacgtctggggcttc
tatccggcggatgtgaccgtcgtgtggatgaagaacgggcagcttgttacttcccacagc
aacaaggagaagacggctcagcctaatggggactggacataccagaccgtctcctaccta
gccttaaccccttcctactgggacatctacacctgcgtggtacagcacagcgggacccct
gagcccatccgcgcgaactggacacccgggctgtcccccatccagacagtgaaggtctct
gtgtctgcagccaccctgggcctgggcttcatcatcttctgtcttggcttcttcagatgg
cgcaagtctcactcctccagctacactcctctccctggatccacctacccggaaggacgg
ccctag
DBGET
integrated database retrieval system