Rattus norvegicus (rat): 29515
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Entry
29515 CDS
T01003
Symbol
Atn1
Name
(RefSeq) atrophin-1
KO
K05626
atrophin-1 (dentatorubral-pallidoluysian atrophy protein)
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
29515 (Atn1)
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Gene cluster
GFIT
Motif
Pfam:
Atrophin-1
Motif
Other DBs
NCBI-GeneID:
29515
NCBI-ProteinID:
NP_001381275
RGD:
61832
Ensembl:
ENSRNOG00000060594
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Position
4:complement(159240573..159254378)
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AA seq
1184 aa
AA seq
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MKTRQNKDSMSMRSGRKKEAPGPREELRSRGRASPGGVSTSSSDGKAEKSRQTAKKARVE
ETSTPKANKQGRSEEISESESEETSAPKKTKTEELPRPQSPSDLDSLDGRSINDDGSSDP
RDIDQDNRSTSPSIYSPGSVENDSDSSSGLSQGPARPYHPPPLFPPSPPPPDSIPRQPES
GFEPHPSVPPTGYHAPMEPPTSRLFQGPPPGAPPPHPQLYPGSAGGGVLSGPPMGPKGGA
AASSVGPPSGGKQHPPPTTPIPISSSGASGAPPAKPPNTPVGAGNLPSAPPPATFPHVTP
NLPPPPALRPLNNASASPPGMGAQPIPGHLPSPHAMGQGMSGLPPGPEKGPTLAPSPHPL
PPASSSAPGPPMRYPYSSCSSSSVAASSSSSAATSQYPASQTLPSYPHSFPPPTSMSVSN
QPPKYTQPSLPSQAVWSQGPPPPPPYGRLLPNNNTHPGPFPPTGGQSTAHPPAPAHHHHQ
QQQQPQPQPQPQPQQHHHGNSGPPPPGAYPHPLESSNSHHAHPYNMSPSLGSLRPYPPGP
AHLPPSHGQVSYSQAGPNGPPVSSSSNSSGSSSQAAYSCSHPSSSQGPQGASYPFPPVPP
ITTSSATLSTVIATVASSPAGYKTASPPGPPQYSKRAPSPGSYKTATPPGYKPGSPPSFR
TGTPPGYRGTSPPAGPGTFKPGSPTVGPGPLPPAGPSSLSSLPPPPAAPTTGPPLTATQI
KQEPAEEYETPESPVPPARSPSPPPKVVDVPSHASQSARFNKHLDRGFNSCARSDLYFVP
LEGSKLAKKRADLVEKVRREAEQRAREEKEREREREREKEREREKERELERSVKLAQEGR
APVECPSLGPVPHRPPFEPGSAVATVPPYLGPDTPALRTLSEYARPHVMSPGNRNHPFYV
PLGAVDPGLLGYNVPALYSSDPAAREREREARERDLRDRLKPGFEVKPSELEPLHGVPGP
GLDPFPRHGGLALQPGPPGLHPFPFHPSLGPLERERLALAAGPALRPDMSYAERLAAERQ
HAERVAALGNDPLARLQMLNVTPHHHQHSHIHSHLHLHQQDAIHAASASVHPLIDPLASG
SHLTRIPYPAGTLPNPLLPHPLHENEVLRHQLFAAPYRDLPASLSAPMSAAHQLQAMHAQ
SAELQRLALEQQQWLHAHHPLHSVPLPAQEDYYSHLKKESDKPL
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgaagacacgacagaataaagactcgatgtcaatgaggagtggacggaagaaagaggcc
cccgggccccgggaagagctgagatcgaggggccgggcctcccctggaggggtcagcacg
tccagcagtgatggcaaagccgagaaatccaggcagacagccaagaaggcccgagtagag
gagacctctaccccaaaagccaacaagcagggccggagcgaggagatctcagagagtgaa
agcgaagagaccagtgcgcccaaaaagaccaagaccgaggagcttccgcgcccacagtct
ccctcggatctggacagcttagatggccgcagcatcaacgatgacggcagcagtgaccct
agagatatagaccaggacaaccgaagcacatcccccagcatctacagccctggcagtgtg
gaaaatgactcggattcatcctctggcctgtcccagggcccggctcgcccctaccaccca
cctccactctttcctccttcccctccaccaccagacagcattccccgacagccagagtct
ggctttgaaccgcacccttctgtgccgcctactggatatcatgctccaatggagcccccc
acatctcggttattccagggcccacctcctggagctcctcccccacacccacagctctac
cctgggagtgctggtggaggtgttttatctggaccccccatgggtcccaaagggggagca
gccgcctcctcagtgggtccccctagtgggggcaagcagcaccccccacccactacccca
attccaatatcaagctctggggccagtggcgctcctccagcaaagccccccaatactcca
gtgggtgctgggaacttaccttctgctccaccaccagctactttcccccacgtgacacca
aacctgcctcctccacctgccctgagacccctcaacaatgcctcagcctctcctcctggc
atgggggctcagccaatccctgggcatctgccctctccccatgccatggggcagggtatg
agtggacttcctcctggcccagagaagggcccaaccctggccccctctccccacccttta
cccccggcttcttcctccgctcctgggcccccaatgcggtacccgtattcatcctgctcc
agtagctctgttgcagcgtcttctagttcctccgccgccacctcccagtacccagcttcc
cagaccctgcccagttaccctcactccttccccccaccaacaagtatgtctgtctctaat
cagccacccaagtacacccagccttctctcccatcccaggctgtgtggagccagggccca
cctcctcctcctccttatggccgcctcttgcccaacaacaacactcatccgggccctttc
cctcctaccgggggtcaatccacagcccacccgccagcccctgcacatcaccatcaccag
cagcagcagcagccacagccacagccacagccacagccgcaacaacatcatcatggaaac
tctgggccccctccacctggggcatatcctcaccccctagagagcagtaactcccaccat
gcacacccttacaacatgtcaccctccctggggtctttgaggccctacccaccagggcca
gcacacctgcctccgtctcatggccaggtgtcttatagccaagcaggtcccaatggtccc
ccggtttcttcttcttccaactcttccgggtcttcgtctcaagccgcctattcatgctca
cacccttcttcatcccagggcccccaaggggcatcctaccccttcccaccagttcctcca
atcaccacctcctcagctactctttccactgtcatcgccaccgtggcttcctcgccagca
ggttataagacagcctcaccacctggcccccctcagtacagcaagagagccccatcccca
gggtcctacaagacagccaccccgcctggatacaagccagggtcaccaccgtccttcaga
acagggaccccacctggctatcgaggcacctctccgccagcaggcccagggaccttcaag
ccaggttcacccaccgtggggccggggcccctaccacccgcggggccttcaagtttgtca
tctctgcctccaccacccgcggccccgactacagggccgcccctgactgccacgcagatc
aaacaggaaccagctgaagagtatgaaacccccgagagtccggtgcctccggctcgcagc
ccctcgccccctcctaaggtggtggacgtgcctagccatgccagccagtcagccaggttc
aataagcacctggaccgtggcttcaactcgtgcgcgcgcagcgacctgtactttgtgccg
ctggagggatccaagctggccaagaagcgcgcggacctggtggagaaagtgcggcgcgag
gccgagcagcgcgcgcgcgaagaaaaagagcgcgagcgcgagcgggaacgtgagaaggag
cgcgagcgcgagaaagagcgcgagctggagcgcagtgtgaaattggcccaggagggccgt
gctccagtggagtgcccgtccctgggtccagtgccccatcggcctccctttgaacctggc
agcgctgtggctaccgtgcccccttacctgggtcctgatactccagccctgcgcactctc
agtgaatacgcccgacctcatgtcatgtctcctggcaatcgcaaccacccattctatgtg
cccttgggggcagtggacccggggcttctgggttacaatgtcccagccctgtacagcagc
gacccagctgcccgagaacgggagcgggaagcccgtgaacgtgacctccgtgaccggctc
aagcctggctttgaggtgaaacctagtgagctggaacccctacatggggtccccgggcca
ggcctggatcccttcccccgacacgggggcctggctctacaacctgggccacctggcctg
catcctttcccttttcatccgagcctggggcccctggaacgagaacggctagcgctggca
gctgggccagccctgcgtcctgacatgtcttatgctgagcggttggcagctgaaaggcag
catgcagaaagggtggcagccctgggcaatgacccactagcccggctgcagatgctcaac
gtgactccccatcatcaccagcactcccacatccactctcacctacacctgcaccagcag
gatgccatccatgcggcctccgcctcggtgcaccctctcattgaccccctggcctcaggg
tctcaccttacccggatcccctacccagctgggaccctccctaatccccttcttcctcac
cctctgcacgagaacgaagttcttcgtcaccagctctttgctgccccttaccgggaccta
ccggcctctctatctgcgccaatgtcagccgcccatcagctgcaggccatgcacgcacag
tcagccgagctgcagcgcttggcactggaacagcaacagtggctgcacgctcatcaccca
ttgcacagcgtgccgctgcctgcccaggaggactactacagtcacctgaagaaggagagt
gacaagccgctgtag
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