Rattus norvegicus (rat): 29637
Help
Entry
29637 CDS
T01003
Symbol
Hmgcs1
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase, cytoplasmic
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
rno
Rattus norvegicus (rat)
Pathway
rno00280
Valine, leucine and isoleucine degradation
rno00650
Butanoate metabolism
rno00900
Terpenoid backbone biosynthesis
rno01100
Metabolic pathways
rno03320
PPAR signaling pathway
Module
rno_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
29637 (Hmgcs1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
29637 (Hmgcs1)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
29637 (Hmgcs1)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
29637 (Hmgcs1)
Enzymes [BR:
rno01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
29637 (Hmgcs1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
Cullin
Motif
Other DBs
NCBI-GeneID:
29637
NCBI-ProteinID:
NP_058964
RGD:
70970
Ensembl:
ENSRNOG00000016552
UniProt:
P17425
A6I5W9
LinkDB
All DBs
Position
2:53379457..53399807
Genome browser
AA seq
520 aa
AA seq
DB search
MPGSLPLNAEACWPKDVGIVALEIYFPSQYVDQAELEKYDGVDAGKYTIGLGQARMGFCT
DREDINSLCLTVVQKLMERNSLSYDCIGRLEVGTETIIDKSKSVKSNLMQLFEESGNTDI
EGIDTTNACYGGTAAVFNAVNWIESSSWDGRYALVVAGDIAIYASGNARPTGGVGAVALL
IGPNAPVIFDRGLRGTHMQHAYDFYKPDMLSEYPVVDGKLSIQCYLSALDRCYSVYRKKI
RAQWQKEGKDKDFTLNDFGFMIFHSPYCKLVQKSLARMFLNDFLNDQNRDKNSIYSGLEA
FGDVKLEDTYFDRDVEKAFMKASAELFNQKTKASLLVSNQNGNMYTSSVYGSLASVLAQY
SPQQLAGKRIGVFSYGSGLAATLYSLKVTQDATPGSALDKITASLCDLKSRLDSRTCVAP
DVFAENMKLREDTHHLANYIPQCSIDSLFEGTWYLVRVDEKHRRTYARRPSTNDHSLDEG
VGLVHSNTATEHIPSPAKKVPRLPATSGEPESAVISNGEH
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgcctgggtcacttcctttgaatgcagaggcttgctggccaaaagatgtgggaatcgtt
gcccttgaaatctactttccttctcagtatgttgatcaagctgagttggaaaaatacgat
ggtgtagatgctggaaagtataccattggcctgggccaggccaggatgggcttctgcacg
gatcgcgaagacatcaactctctctgcctgactgtggttcagaaactgatggagagaaat
agcctttcctatgactgcattgggcggctggaagtcgggacagagacaatcatcgacaaa
tcaaaatccgtgaagtctaatttgatgcagctgtttgaggagtctgggaatacagatata
gaaggaatagatacaactaatgcatgctatgggggcacagccgcagtcttcaatgctgtg
aactggatcgaatccagctcttgggatggacgatacgctttggtagttgcaggagacatc
gctatatatgcctcaggaaacgccaggcctacaggtggagttggagctgtggctctgcta
attgggccaaatgctcctgtaatttttgaccgagggcttcgtgggacacacatgcagcat
gcctacgacttttacaagcctgacatgctctctgaataccctgtggtagatggaaaactc
tccatacagtgctacctcagcgcattggaccgctgctattctgtctaccgcaaaaagatc
cgggcccagtggcagaaagagggaaaggataaagattttaccctgaatgattttggcttc
atgatctttcactcgccatactgtaaactggtgcagaaatctctagctaggatgttcctg
aatgactttcttaacgatcaaaacagagacaaaaacagtatttacagtgggctggaagcc
tttggggatgtgaaattagaagatacttacttcgacagagatgtggaaaaggcatttatg
aaggctagtgctgagctattcaaccagaaaacaaaggcatctttgcttgtatcgaatcaa
aatggaaacatgtacacatcctctgtatacggttcccttgcttctgttctggcacagtac
tcacctcaacagttggccgggaagaggattggagtgttctcttacggttctggcttggct
gccacactctactcccttaaagtcacacaagatgccacaccaggatctgctcttgacaaa
ataacagcaagtttatgtgaccttaagtcaaggcttgactcaagaacgtgtgtggcacca
gacgtctttgctgaaaacatgaagctcagagaggacacacatcacttagccaactatatt
ccccagtgttcaatagattcactcttcgaaggaacatggtatctagtcagagtggatgaa
aagcacagaagaacttacgcccggcgtccctccacaaatgaccacagtttggatgaagga
gtgggacttgtgcattcaaacacagctacagagcatattccaagcccggctaagaaagtg
ccaagacttcctgcgacctcgggcgaacctgagtcggctgtcatcagtaacggggagcac
tga
DBGET
integrated database retrieval system
