Rattus norvegicus (rat): 296953
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Entry
296953 CDS
T01003
Symbol
Irf5
Name
(RefSeq) interferon regulatory factor 5
KO
K09446
interferon regulatory factor 5
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
296953 (Irf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rno03000
]
296953 (Irf5)
Transcription factors [BR:
rno03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
296953 (Irf5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
296953
NCBI-ProteinID:
NP_001100056
RGD:
1310447
Ensembl:
ENSRNOG00000007437
LinkDB
All DBs
Position
4:59092914..59104596
Genome browser
AA seq
497 aa
AA seq
DB search
MNQSAPGIPTPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFYIPWRHATRHGPSQDGD
NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFQLYYDGPRDMPPQPYKIYEV
CSNGPAPTESQPTDDYVLGEEEEEEDEELQRMLPGLSITEPVLPGPPIAPYSLPKEDTKW
PPALQPPVGLGPPPPDPNLLAPPSGDSAGFRQLLPEVLEPGPLASNQPPTEQLLPDLLIS
PHMLPLTDLEIKFQYRGRPPRALTISNPQGCRLFYSQLEATQEQVELFGPVTLEQVRFPS
PEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCALAHGSCPNPI
QREVKTKLFSLEQFLNELILFQKGQTNTPPPFEIFFCFGEEWPDLKPREKKLITVQVVPV
AARLLLEMFSGELSWSADSIRLQISNPDLKDHMVEQFKELHHIWQSQQRLQPMVQAPPVA
GLDAGQGPWPMHPVGMQ
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagtcagccccagggattcccacaccaccccgccgtgtgaggctgaagccctgg
ctggtggcccaggtgaacagctgccagtacccagggctccagtgggtcaacggggaaaag
aaactcttctatatcccctggcgccatgctacaaggcacggtcccagccaggatggagac
aacaccatcttcaaggcctgggctaaagagacagggaagtacacggagggcgtggatgag
gctgacccagccaaatggaaggccaacctgcgctgtgcccttaacaaaagccgtgacttc
cagctgtactatgatggccctcgagacatgccacctcagccctacaagatctacgaggtc
tgctccaatggccctgctcccacagagtcccagcccacagatgattacgttctgggagaa
gaggaggaagaggaagatgaagagctccagagaatgctaccaggcctgagtatcacagaa
cctgtgctacctgggcctcccatagcaccctattccttacccaaagaagacaccaagtgg
ccacctgctctccagccacctgtagggctgggtccccctcccccagacccaaatctcctg
gcccctccctctggagattctgctggctttaggcagcttctccctgaggtcctggagcct
ggacccctggcttccaaccagccccctacagaacaactcttgcctgacctgctcatcagc
ccccacatgctgcctttgactgacctagagatcaagttccagtaccggggacgtccaccg
cgggccctcaccatcagcaacccacaaggctgcaggctcttctatagccagctagaggct
acccaggagcaagtggaactctttggccctgtgaccctggagcaagttcgcttccctagc
ccagaggatatccccagtgacaagcagcgcttctatacgaaccagctgctggatgtcctg
gaccgagggctcatcctgcagctgcagggccaggacctgtatgccatccgtctgtgccag
tgtaaggtgttctggagtgggccctgtgccttggcccatggttcctgccccaaccccatc
cagcgggaagtcaagacaaagctctttagcctagagcagtttctcaatgaactcatcctg
ttccagaagggccaaaccaataccccaccaccttttgagatcttcttttgctttggagaa
gaatggcctgacctcaaaccccgagagaagaagctcattactgtacaggtggtacctgtc
gcagcccggttgctgctggagatgttctcaggagagctttcttggtcagcagacagcatt
cggctgcagatctcaaacccggatctcaaagaccacatggtagagcagttcaaagagctc
catcacatctggcagtcccagcagcgcttgcagcccatggtccaggcccctcctgtggca
ggccttgatgctggccaggggccctggcccatgcacccagttggcatgcaatag
DBGET
integrated database retrieval system
