Rattus norvegicus (rat): 300438
Help
Entry
300438 CDS
T01003
Symbol
Ldlr
Name
(RefSeq) low-density lipoprotein receptor precursor
KO
K12473
low-density lipoprotein receptor
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04144
Endocytosis
rno04913
Ovarian steroidogenesis
rno04925
Aldosterone synthesis and secretion
rno04927
Cortisol synthesis and secretion
rno04934
Cushing syndrome
rno04976
Bile secretion
rno04979
Cholesterol metabolism
rno05145
Toxoplasmosis
rno05160
Hepatitis C
rno05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
300438 (Ldlr)
09150 Organismal Systems
09152 Endocrine system
04913 Ovarian steroidogenesis
300438 (Ldlr)
04925 Aldosterone synthesis and secretion
300438 (Ldlr)
04927 Cortisol synthesis and secretion
300438 (Ldlr)
09154 Digestive system
04976 Bile secretion
300438 (Ldlr)
04979 Cholesterol metabolism
300438 (Ldlr)
09160 Human Diseases
09172 Infectious disease: viral
05160 Hepatitis C
300438 (Ldlr)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
300438 (Ldlr)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
300438 (Ldlr)
09167 Endocrine and metabolic disease
04934 Cushing syndrome
300438 (Ldlr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
300438 (Ldlr)
Membrane trafficking [BR:
rno04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
300438 (Ldlr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
SGL
EGF_CA
EGF
hEGF
Gag_p24
Motif
Other DBs
NCBI-GeneID:
300438
NCBI-ProteinID:
NP_786938
RGD:
2998
Ensembl:
ENSRNOG00000009946
UniProt:
P35952
LinkDB
All DBs
Position
8:20270020..20292981
Genome browser
AA seq
879 aa
AA seq
DB search
MSTADLMLRWAIALLLAAAGVAAEDSCGKNEFQCRDGKCIVSKWVCDGSRECPDGSDESP
ETCMSVTCRSGEFSCGGRVSRCIPDSWRCDGRTDCENGSDELDCSPKTCSLDEFRCQDGK
CISRQFVCDQDWDCLDGSDEAHCAATTCGPAHFRCNSSSCIPSLWACDGDRDCDDGSDEW
PQNCGGRDTAAEVVSSPCSSLEFHCGSSECIHRSWVCDGAADCKDKSDEENCAVTTCRPD
EFQCADGSCIHGSRQCDREHDCKDMSDELGCINVTQCDGPNKFKCHSGECISLDKVCNSA
RDCRDWSDEPIKECKTNECLDNNGGCSHICKDLKIGYECLCPSGFRLVDGHQCEDIDECQ
EPDTCSQLCVNLEGSFKCECRAGFHMDPHTRVCKAVGSIGFLLFTNRHEVRKMTLDRSEY
TSLIPNLKNVVALDTEVANNRIYWSDLSQRKIYSAVMDQGTSLSYDAIISGDLHAPDGLA
VDWIHGNIYWTDSVPGTVSVADTKGVRRRTLFREKGSRPRAIVVDPVHGFMYWTDWGTPA
KIKKGGLNGVDIYSLVTEDIQWPNGITLDLPSGRLYWVDSKLHSISSIDVNGGGRKTILE
DEKQLAHPFSLAIYEDKVYWTDVLNEAIFSANRLTGSDVNLVAKNLMSPEDIVLFHNVTQ
PRGVNWCEATVLPNGGCQYMCLPAPQISAHSPKFTCACPDGMLLAKDMRSCLPEVDTVPT
TQGTSTIGPVVTTSAAVSLKRKEDPSATRHKEDPSATRHKEDPSATSTSRQPGDTPELST
VESVTVSSQVQGDMAGRGDEVQRHGVGFLSIFLPIALVALLVFGAILLWRNWRLRNINSI
NFDNPVYQKTTEDEIHICRSQDGYTYPSRQMVSLEDDVA
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgcggatctgatgctacgctgggccatcgccctgctcctggctgctgctgga
gttgcagcagaagattcatgtggcaagaacgagttccagtgtagagacggaaaatgcatc
gtcagcaagtgggtgtgtgacggcagccgcgagtgcccggatggctccgatgagtcccct
gagacatgcatgtctgtcacctgtcgatccggtgagttcagctgtggaggccgcgtcagc
cgatgcattcctgactcctggagatgtgatgggcggaccgactgtgaaaatggctcggat
gaactagactgctcccccaagacgtgctccctggatgagttccgctgccaggatggcaag
tgcatctcccggcagtttgtgtgtgaccaagactgggattgcctggatggctctgacgag
gcccactgtgcggccaccacttgtggccctgctcacttccgctgcaactcctcttcctgc
atccccagcctgtgggcctgcgacggggaccgggactgtgacgatggctccgatgagtgg
ccgcagaactgcgggggccgagacacggccgctgaggtggtcagcagcccctgctcctcc
ctcgagttccactgtggcagtagtgagtgtatccatcgcagctgggtctgtgacggtgcg
gctgactgcaaggacaagtcggacgaggagaactgcgcggtgaccacctgccgacctgac
gaattccagtgtgcagatggctcctgtattcacggtagccgccagtgtgaccgtgaacat
gactgcaaagacatgagcgacgagcttggctgcatcaatgtgacccagtgcgatggccct
aacaaattcaagtgccacagtggggagtgcatcagcttggacaaggtgtgcaactccgcc
cgggactgtcgtgactggtcggatgagcccatcaaggagtgcaagaccaacgagtgcttg
gacaacaatggtggctgttcccacatctgcaaggacctcaagattggctatgagtgccta
tgtcccagcggtttccggttggtggacggccaccagtgtgaagatattgacgagtgtcag
gagccagacacctgcagccagctctgtgtgaacctggagggcagcttcaagtgcgagtgt
cgggccggcttccacatggaccctcacaccagggtctgcaaggctgtgggttccataggg
tttctgctcttcaccaaccgccatgaggtacgtaagatgaccctggaccgcagcgagtat
accagcctgatccccaacctgaagaatgtggtggcgctggacactgaggtggccaacaat
agaatttactggtctgacctgtcccagagaaagatctacagcgccgtgatggaccagggc
accagcttgtcctatgatgccatcatcagtggggacctgcacgcccctgacgggctggcg
gtagactggatccatggcaacatctactggacggattcagttccgggcactgtttccgtg
gctgacaccaagggtgtcaggaggagaactctgttccgagagaaagggtccagacccaga
gccatcgtagtggaccctgtgcatggcttcatgtactggacagattgggggacacctgcc
aagatcaagaaagggggtttgaatggtgtagacatctactctctggtgaccgaggacatc
cagtggccaaatggcatcacactagatcttcccagtggccgcctctattgggttgattcc
aaactccactccatctccagcatcgatgtcaatgggggtggtcggaaaaccattttggag
gatgagaagcagctagctcaccccttctccttggccatctatgaggacaaagtgtattgg
acagatgtcttaaatgaagccattttcagtgccaaccgcctcacgggttcagatgtgaat
ttggtggctaaaaacctcatgtccccggaggacattgtcctgtttcacaacgtcacgcag
cctagaggggtaaactggtgtgaggcaacggttctccccaacggtggctgccagtacatg
tgcctgcctgcccctcagatcagtgcccactcacccaagttcacctgcgcttgccctgat
ggtatgctactggccaaggacatgaggagctgcctcccagaagtcgacactgtaccgacc
acccaggggacatccaccattgggcctgtggtcaccacatcagctgctgtgtcactgaag
cgcaaggaggatccctcagctactaggcacaaggaggatccctcagctactaggcacaag
gaggatccctcagctaccagcacctctaggcagcctggggataccccagagctcagcaca
gtggagtcggtgacagtgtcctcccaagtccaaggtgacatggctggcagaggggacgag
gtgcagcggcacggtgtggggttcttgtccatcttcctccccattgcactggtggccctc
cttgtcttcggagccatcctcctgtggaggaactggcggctgaggaacattaacagcata
aactttgacaacccagtctaccagaagaccacggaggacgagatccacatttgccgcagc
caggatggctatacctacccctcgagacagatggtcagcctggaggatgatgtggcatga
DBGET
integrated database retrieval system
