Rattus norvegicus (rat): 301085
Help
Entry
301085 CDS
T01003
Symbol
Fyco1
Name
(RefSeq) FYVE and coiled-coil domain-containing protein 1
KO
K21954
FYVE and coiled-coil domain-containing protein 1
Organism
rno
Rattus norvegicus (rat)
Pathway
rno05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
301085 (Fyco1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
301085 (Fyco1)
Membrane trafficking [BR:
rno04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
301085 (Fyco1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FYVE
RUN
GOLD_2
GOLD_PATL1_C
Motif
Other DBs
NCBI-GeneID:
301085
NCBI-ProteinID:
NP_001100340
RGD:
1309069
Ensembl:
ENSRNOG00000006336
UniProt:
D3Z9D2
A6I4C6
LinkDB
All DBs
Position
8:complement(132289538..132356810)
Genome browser
AA seq
1451 aa
AA seq
DB search
MASSSTETQLQRIIRDLQDAVTELSNEFKEGGEPITDDSTSLHKFSYKLEYLLQFDQKEK
ASLLGSKKDYWDYFCACLAKVKGANDGIRFVRSISELRTSLGKGRAFIRYSLVHQRLADT
LQQCFMNTKVTSDWYYARSPFLKPKLSSDIVGQLYELTEVQFDLASRGYDLDAAWPTFAR
RTLATSSSYMWKPPSRSSSMSSLVSNYLQTQEMASSLDLNSSLNNEALESFDEMRLELDQ
LEVREKQLQEHVQQLNRENQALRMTISKQGGQLQVEKETGYLAVEDSIDLVSLVAELQKQ
GEVTQATVKKLQTCLQALELAVDQKETSHSVLQLENVAQALDAVRDSLGRKNQLLASLSE
CLTRAEKREHPSLDTKLHQEPVPTDLALKFQELKGKLQTLEGENTKAQELNRQQSLKLEQ
LAKELQLKEEARASLEHLVKDAVPLQEELSGKKQESAQLRRQLQESLAHLSSVEEELAEA
RQQEKQHREEKQLLEQEAKSLTWQLQLLETQLGQVSQLVSDLEEQKKQLMQDKDHLSQKV
GTLEQLAEAHGASKSKEAVPPQAGEMPEKGQHCLQEEQVNNATVRGADQDELQKVNQELQ
KELQNMAVRNQLLEGKLQALQTDYKALQQREAAIQGSLASLEAEQASIRQLGNQMEASLL
AVRKAKETMKAQVAEKEAALQSKEGECRQLQEEAEQCRLRTEAQAQELRALENQCQQQIQ
LIEVLSAEKGQQGLSLPQVNTAQLALSQAQLEIHQGEAQRLQNEVVDLQAKLQVALGDRD
KLQSQLGVAEAVLGEHKTLVQQLKEQNEALNRAHIQELLQCSEREGILQEESIYKAQKQE
QELRALQAELSQVRCSSEGAHLEHAELQDQLHRANTDTAELGIQVCALTAEKDRMEGALA
SLAQELQDSKEAALQERKGLELQVMQLQQEKESLQEKLKATEEAASSFSVLQAQLAQAEQ
LAQSLQEAAHQEQDALKFQLSAEIMDHQNRLKTANEECGSLRAQLEEQGQELQMTKEAVQ
ELKITKATMEEKLNCTGSHLAECQATLLRKDEESAMLRINLERTQKELEKATSKFQEYYN
KLCQEVTNRERNDQKMLADLDDLNRTKKYLEERLIELLRDKDALWQKSDALEFQQKLSAE
EKCLGDMEANHCHDCKREFSWIVRRHHCRLCGRIFCYYCCNNYVVTKPSGKKERCCRACF
QKFGESSGSPDSSGSGTSQGEPSPMVSPAEAAPQSIGSQGINPVCRPPDDAVFDIITDEE
LCQIQESGSSLPETPTETDSMDPNMAEQDTTSNSLTPEDTEDMPLGQDAEICLLKSGELM
IKLPLTVEEIASFGEGNRELFVRSSTYSLIPITVAEPGLTISWVFSSDPKSISFSVVFQE
TEDTPLDQCKVLIPTTRCNSHKESIRGQLKVRTPGIYLLIFDNTFSRFISKKVFYHLTVD
RPVIYDGSDFP
NT seq
4356 nt
NT seq
+upstream
nt +downstream
nt
atggcttctagcagcactgagacgcagctccagaggatcatccgtgatctacaagatgca
gtgacagaactaagcaatgaatttaaggaaggcggagaaccaatcacagatgacagcacc
agcttgcacaagttttcttacaaacttgagtatcttctgcaatttgatcagaaggagaag
gctagcctcctgggtagcaagaaggactactgggattacttctgtgcgtgcctagccaag
gtgaaaggagccaatgatgggattcgattcgtcaggtccatctctgagctccgaacatct
ctaggaaaggggagagccttcattcgctactctttggtgcaccagaggttggcagacacc
ttgcagcagtgcttcatgaacaccaaagtgaccagtgactggtattatgcaagaagcccc
tttctgaagccaaagctgagctctgacattgtgggccagctgtatgagctgactgaggtt
cagtttgatctagcatcaagaggctacgacttggatgccgcctggccaacatttgccagg
aggacgctagccaccagctcttcttacatgtggaaaccccccagccgaagctccagcatg
agtagtttagtgagcaactacttgcagactcaggagatggcctccagtcttgacctgaat
agttctctaaacaatgaagcactagaaagcttcgatgagatgcggctggagctggaccag
ttggaggttcgggagaaacagctacaagagcacgtgcagcagctaaacagggaaaaccaa
gcacttcgaatgacgatcagcaagcaaggggggcaacttcaggtagagaaggaaacgggg
taccttgcagtcgaggatagcattgacctcgtgagcctggtggcagagctccagaagcag
ggggaggtcacccaggccacagtgaagaagctacagacatgtctacaggctctggagtta
gctgtagaccagaaagagaccagccactcagtcttgcagcttgagaacgtggcacaggca
cttgacgctgtgagagactccttgggtaggaagaaccagcttctagccagcctttctgaa
tgcctcactagggctgaaaaaagggaacatccatctctggacacaaagcttcatcaagag
ccagttcctactgacctggccctgaagttccaggagctgaagggaaaacttcaaacccta
gaaggagagaacaccaaggcccaggagctaaacaggcagcaaagtctcaagctagagcag
ctggccaaggagctgcagctgaaggaggaagcccgagctagcctggaacacttagtgaag
gatgcggtcccacttcaggaagagctatccggaaagaagcaagagtcagctcagctccga
cgacagcttcaggaatccctggcccacttgagctctgtggaggaggagctggctgaagcc
agacagcaggaaaagcagcatcgagaagaaaaacagctactagagcaggaggccaagtct
ctgacatggcagctgcagctcctagagacccaactaggacaggtgagtcagcttgtgagt
gacctggaggagcagaagaagcaactcatgcaggacaaagaccatctcagccagaaagta
ggaacactagagcagctagctgaggcccatggggcaagtaagagtaaagaggctgtccca
ccacaggctggggagatgccagaaaaggggcagcactgcctccaggaagaacaggtaaac
aatgccacagtgcgaggggcagaccaggacgagttacaaaaggtcaaccaggagctacag
aaggagctgcagaacatggctgtgcgcaaccagctcctagaaggcaaactgcaggccttg
caaactgattacaaggcactgcagcagcgagaggcagcaatccagggctctttagcctcc
ctggaagctgagcaggccagcatccggcagctgggaaaccagatggaagcaagcctcctg
gctgtgaggaaagccaaagagactatgaaggcccaggtggcagagaaggaggctgccctg
cagagtaaggagggcgagtgccggcagctgcaggaagaggcagagcagtgccggcttcgg
acagaggcccaggcccaggagctcagagctcttgagaaccagtgccagcagcagattcaa
ctgattgaggtcctctctgcagaaaaaggccaacagggactcagcctaccccaggtcaac
acagcccaactggccctgtctcaagcacagcttgaaattcaccagggggaagcccagcgg
ttacagaatgaggtggtggacctccaggccaagctccaggtggccctaggtgatcgagac
aagttacagagccaactgggtgtggctgaggcagttctcggggagcacaagaccctggtg
caacaactgaaagaacagaatgaagccctcaacagggcccatattcaggagctgctgcag
tgctcagagagagaggggatactgcaggaggagagcatctacaaggcccagaagcaggag
caagagctacgagccctgcaggcagagctgtcacaggtgaggtgcagctctgagggagcc
cacctggagcatgcagagctacaggaccagctgcaccgagccaacacagacacagctgag
ctaggcatacaggtctgtgcactgacagctgagaaggatcggatggagggggccctggcc
agcctagcccaggagctccaggactccaaagaagcagcactacaggaacgaaagggctta
gagctccaagtgatgcaacttcagcaagagaaggagagcttgcaggaaaagctgaaggca
actgaggaggcagccagttcattctctgttcttcaggcacagctggcccaggctgagcag
ctggcccagagcctccaagaggctgcacaccaggaacaagatgcccttaagttccagcta
agtgctgagattatggaccaccagaacagactaaagacagccaatgaagagtgtgggagc
ctcagggcccagctagaagaacaaggccaggagctgcaaatgactaaggaggctgtgcag
gaactgaagatcaccaaggcgaccatggaggagaagctgaattgcaccggtagccacctt
gcagagtgccaggccactttgctacgcaaagatgaagaaagcgctatgcttcgaatcaac
ctagagagaacacagaaggaacttgaaaaggctacatcaaaattccaagaatattacaac
aaactctgccaggaggtgacaaacagggaaaggaatgaccagaagatgcttgcagaccta
gatgacctgaacagaaccaagaaataccttgaggagcggctgatagagctgctcagggac
aaagatgctctctggcaaaagtccgatgcactggaattccagcagaagctcagtgctgaa
gagaaatgtcttggggacatggaggccaaccactgccatgactgcaagcgggagttcagc
tggatagtgcggcggcaccactgcaggttatgtggccgaatattctgttactactgctgt
aacaactatgttgtgactaagcccagtggcaagaaggaacggtgctgccgagcctgcttc
cagaagtttggtgaaagctctggatcccctgacagcagtggttcgggcactagccaggga
gagcccagccccatggtgtcaccagctgaagcagctccccagtccataggaagccaagga
ataaacccagtctgcagaccaccagatgatgctgtgtttgacatcatcaccgatgaggaa
ctgtgccagatccaagaatctggctcctccttgcctgaaacacccaccgaaactgattcg
atggacccaaatatggctgaacaggacaccacatcaaactcattaacccctgaagacact
gaagacatgcccctggggcaggatgctgaaatctgcttgctgaagtcaggagagctgatg
atcaaattacccctcacagtagaggagatcgccagctttggggagggaaacagggagctg
tttgtgaggtccagtacctacagcctgatccccatcaccgtggctgagcccggccttacc
atcagctgggtcttctcttctgatcccaagagcatctccttcagtgtggtcttccaagag
acagaagacacgccactcgaccagtgcaaggtcctcattcccaccacacgctgcaattcc
cacaaggagagcatccggggccagctgaaggtccgaacccctggcatctacttgctcatc
tttgacaacaccttttccagatttatctccaaaaaagtattttaccacctgaccgttgac
cggcctgtgatctacgatggaagtgatttcccatag
DBGET
integrated database retrieval system
