Rattus norvegicus (rat): 304859
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Entry
304859 CDS
T01003
Symbol
Dhx9
Name
(RefSeq) ATP-dependent RNA helicase A
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rno03041
]
304859 (Dhx9)
03012 Translation factors [BR:
rno03012
]
304859 (Dhx9)
Enzymes [BR:
rno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
304859 (Dhx9)
5.6.2.6 RNA 3'-5' helicase
304859 (Dhx9)
Spliceosome [BR:
rno03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
304859 (Dhx9)
Translation factors [BR:
rno03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
304859 (Dhx9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
DEAD
HA2_N
HA2_C
Dicer_dimer
nSTAND3
AAA_19
ResIII
T2SSE
AAA_22
AAA_14
ATPase
PhoH
Motif
Other DBs
NCBI-GeneID:
304859
NCBI-ProteinID:
NP_001382485
RGD:
1308548
Ensembl:
ENSRNOG00000002735
LinkDB
All DBs
Position
13:complement(68152813..68189580)
Genome browser
AA seq
1392 aa
AA seq
DB search
MGDIKNFLYAWCGKRKMTPAYEIRAVGNKNRQKFMCEVRVEGFNYAGMGNSTNKKDAQSN
AARDFVNYLVRINEVKSEEVPAVGIVPPPPILSDTSDSTASTGEGLPPPMGGPLPPHLAL
KAAENNSGVESSSGYGSPGPTWDRGANLKDYYSRKEEQEVQATLESEEVDLNAGLHGNWT
LENAKARLNQYFQKEKIQGEYKYTQVGPDHNRSFIAEMTIYIKQLGRRIFAREHGSNKKL
AAQSCALSLVRQLYHLGVIEAYSGLTKKKEGERVEPYKVFLSPDLELQLQNVVQELDLEI
VPPPVDPSMPVILNIGKLAHFEPSQRQNAVGVVPWSPPQSNWNPWTSSNIDEGPLAYAST
EQISMDLKNELAYQMEQDHNLQSVLQERELLPVKKFEAEILEAISQNSVVIIRGATGCGK
TTQVPQYILDDFIQNDRAAECNIVVTQPRRISAVAVAERVAYERGEEPGKSCGYSVRFES
ILPRPHASIMFCTVGVLLRKLEAGIRGISHVIVDEIHERDINTDFLLVVLRDVVLAYPEV
RIVLMSATIDTTMFCEYFFNCPIIEVYGRTFPVQEYFLEDCIQMTQFIPPPKDKKKKDKE
DDGGEDDDANCNLICGDEYGPETKLSMSQLNEKETPFELIEALLKYIETLNVPGAVLVFL
PGWNLIYTMQKHLENNSHFGSHRYQILPLHSQIPREEQRKVFDPVPDGVTKVILSTNIAE
TSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLC
SRARFDRLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLR
ELDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAVCTISAATCFPEPFISEG
KRLGYIHRNFAGNRFSDHVALLSVFQAWDDARMSGEEAEIRFCEQKRLNMATLRMTWEAK
VQLKEILINSGFPEDCLLTQVFTNTGPDNNLDVVISLLAFGVYPNVCYHKEKRKILTTEG
RNALIHKSSVNCPFSSQDMKYPSPFFVFGEKIRTRAISAKGMTLVTPLQLLLFASKKVQS
DGQIVFIDDWIRLQISHEAAACITALRAAMEALVVEVSKQPNIISQLDPVNEHMLNTIRQ
ISRPSAAGINLMIGSVRYGDGPRPPKMARYDNGSGYRRGYGGGGYGGGGYGGGYGSGGFG
GGFGSGGGGGFGGGFNSGGGGGFGSGGGGFGSGGGGFGGGGGGFSGGGGGGGFGGGRGGG
GGGGFGGSGGFGSGGGGYGVGGGGYGGGGGSGGYGGGSGGYGGGGGGYGGGEGYNMSPNS
YRGNYGGGGGGYRGGSQGGYRNNFGGDYRGSSGDYRGSGGGYRGSGGFQRRGYGGGYFGQ
GRGGGGGGGGGY
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatattaaaaattttctgtatgcctggtgtggcaaaaggaagatgactccagcc
tatgaaattagagcagtaggaaacaaaaacagacagaaattcatgtgtgaggttcgagta
gaagggtttaattatgctggtatgggcaattccaccaataagaaagatgcacagagcaat
gctgccagagacttcgttaactatttggttcgaatcaatgaagtcaagagtgaagaagtt
cctgctgttgggattgtaccacccccacccatacttagtgacacatctgatagcacagca
agtactggagaaggcttaccaccacccatgggaggaccacttcctcctcatctggctctc
aaagcagcagaaaataattctggagttgagtcttcatctggctatggttctcctggaccc
acctgggaccgaggagccaacttaaaggattactactcaagaaaggaagagcaagaggtg
caagcgactctagagtcagaagaagtggatttaaatgctgggcttcatggaaactggact
ttggaaaatgctaaggctcgtctgaaccagtatttccaaaaagaaaaaatccaaggagaa
tataagtacacccaagtgggtcccgaccacaacaggagctttattgcagaaatgaccatt
tatatcaagcagttgggcagaaggatttttgcacgtgaacatggatcaaataagaaatta
gcagcacagtcatgtgccctctcactagtccgacaactctatcatcttggagtgattgaa
gcttactctggtcttacaaagaagaaagaaggagagagagtggagccttacaaagttttc
ctttccccagatttggagcttcagttgcaaaatgtggttcaagagctagatctggaaatt
gttcccccacctgttgatccttctatgccagttatactcaacattgggaaattggctcat
tttgaaccatctcagaggcaaaatgcagtgggagtggttccttggtcacccccacagtcc
aactggaatccttggacaagtagcaacattgatgaggggccccttgcttatgcttctaca
gaacaaataagcatggaccttaagaatgaattagcataccagatggaacaggatcataat
ttacagagtgtgttacaagagagagagttgcttcctgtgaagaaatttgaagctgaaatt
ctggaagccattagtcaaaattcagttgtgattatccgaggggctactggttgtggtaaa
accacgcaagttccacaatacattttggatgacttcatccagaatgacagagcagctgag
tgcaatattgttgtgactcagcccagaaggatcagtgcagttgcggtggctgagcgagtt
gcttatgagagaggagaagaacctggaaaaagctgtggctacagtgtccggtttgagtct
atacttccacgccctcatgccagtataatgttttgtactgtaggtgtgctactaagaaaa
ctagaagcaggcattcgaggaatcagtcatgttattgtagatgaaattcatgaaagagat
attaatactgacttcctcttagtagtactgcgtgacgtggttctggcttatcctgaagtt
cgtattgttcttatgtctgcaactattgataccaccatgttctgtgaatatttcttcaat
tgccccatcattgaagtttatggaaggactttcccagttcaagaatattttctggaagat
tgcattcagatgacccaattcattcctcctccaaaggacaagaaaaagaaggataaagag
gatgatggtggtgaagatgatgacgcaaattgcaatctcatatgtggtgacgaatatgga
ccagaaacaaagttgagcatgtctcagttgaatgaaaaggaaactccctttgaacttatt
gaagcactccttaaatacattgaaacccttaatgttcctggagctgtgttggtattttta
cctggctggaacttgatttatactatgcagaagcatttagaaaataactcacatttcgga
agtcaccggtatcagattctacctctccattctcagattcctcgggaggaacagcgcaaa
gtgtttgatccagtaccagatggagtaaccaaggttattttgtccacaaacattgctgaa
acaagcattaccataaatgatgttgtttatgtcattgactcctgcaaacaaaaagtgaaa
ctctttactgctcacaacaatatgaccaactatgctactgtatgggcatcaaaaacaaac
cttgagcaaaggaaagggcgagctggccgtgtacgacctgggttctgtttccacctttgt
agtcgggctcgttttgacagactggagacccacatgacaccagagatgtttagaacacca
ttgcatgaaattgctctgagcataaaacttctgcgcctaggaggaattggccaattcctt
gcaaaggcaattgaacctccacctttggatgcagtaattgaagcagagcatactcttaga
gaacttgatgctttagatgccaatgatgagttgactcctcttggacgaatcctggctaaa
ctccccattgagcctcgttttggaaaaatgatgataatggggtgtattttctatgtggga
gacgctgtctgtaccatctctgctgctacctgctttccagagccctttatcagtgaaggg
aagcgcttggggtacatacatcggaattttgctggaaacagattttctgatcatgtggct
cttttatcagtattccaagcctgggatgatgctaggatgagtggagaagaagcagaaata
cggttttgtgagcagaagagactaaatatggctacactaagaatgacttgggaagccaaa
gtacagcttaaagagatactgattaactctggctttccagaagattgtttattgacacaa
gtgtttactaacactggaccagataataatttggatgttgttatctctttgctggctttt
ggtgtgtaccccaatgtatgctatcataaagagaagagaaagattcttaccactgaaggt
cgtaatgcacttatccacaagtcttctgtgaactgtccttttagcagccaagacatgaag
tacccatctcctttctttgtttttggtgaaaagattcgaacccgagccatctctgctaaa
ggcatgaccttagtgacccctctacaattacttctctttgcctccaagaaagtccagtct
gatggtcagatcgtgtttatagatgactggatcagactgcaaatatcacatgaagctgca
gcatgcatcacagccctccgggcagccatggaagctctggttgttgaagtatccaaacaa
ccaaacattatcagccagttggaccctgtcaatgagcatatgctaaacaccatccgtcag
atttctaggccctcagctgctggtatcaaccttatgattgggagtgtaaggtatggcgat
ggtccgaggcctcccaagatggcccgatacgataatggaagtggatatagaaggggatat
ggaggaggaggatatggtggtggtggatacggtggtggatatggtagtggaggctttgga
ggcggctttggaagtggtggtgggggaggctttggaggaggctttaacagtggtggggga
ggaggctttggtagtggtgggggtggctttggcagtggcggaggtggatttggtggtggg
ggaggaggcttcagtgggggaggtggtgggggtggatttggtggtggccgaggaggcggc
ggcggtggtggctttgggggtagtggaggttttggaagtggtgggggaggctatggtgtt
ggaggtggtggctatggaggtggtggcggtagtggtgggtatggaggaggcagtggagga
tatggaggtggtggagggggttacggaggtggggaaggttataatatgagccccaactct
taccgaggaaattatggtggaggtgggggaggttatagaggaggttcccaaggaggctac
agaaacaacttcggtggagactacagaggatctagtggagactaccggggatctggtggg
ggctatagaggatctggaggattccagcgaaggggttatggaggtggttattttggacaa
ggaagaggaggtggtggtggtggtggtggcggctattaa
DBGET
integrated database retrieval system