Rattus norvegicus (rat): 306804
Help
Entry
306804 CDS
T01003
Symbol
Iars1
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
rno
Rattus norvegicus (rat)
Pathway
rno00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
306804 (Iars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rno01007
]
306804 (Iars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rno03016
]
306804 (Iars1)
Enzymes [BR:
rno01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
306804 (Iars1)
Amino acid related enzymes [BR:
rno01007
]
Aminoacyl-tRNA synthetase
Class I (U)
306804 (Iars1)
Transfer RNA biogenesis [BR:
rno03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
306804 (Iars1)
Prokaryotic type
Other AARSs
306804 (Iars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Ubiquitin_IARS1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
306804
NCBI-ProteinID:
NP_001094042
RGD:
621022
Ensembl:
ENSRNOG00000014616
UniProt:
A6J6V4
F1LS86
LinkDB
All DBs
Position
17:complement(15147357..15193716)
Genome browser
AA seq
1262 aa
AA seq
DB search
MVQQVPENISFPAEEEKILQFWSKYNCFQECLKQSKLRPKFTFYDGPPFATGLPHYGHIL
AGTIKDIVTRYAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGIKGPEDVAKMGIAEYNKQC
RAIVMRYSAEWKSTVTRLGRWIDFDNDYKTLYPQFMESVWWVFKQLYDKGLVYRGVKVMP
FSTACGTPLSNFESNQNYKDVQDPSVFVTFPLEEDENTSLVAWTTTPWTLPSNLALCVNP
EIQYVKIKDVSRGKLFILMEARLSALYKQESDYEILERFPGASLKGKKYKPLFDYFIKCK
ENGAFTVLVDHYVKDEEGTGVVHQAPYFGADDHRVCMDFNIIQKDSAPVCPVDASGCFTE
EVTHFVGQYVKDADKNIIRMLKEQGRLLVASTFTHSYPFCWRSDTPLIYKSVPSWFVRVE
HMVDQLLKNNDLCYWVPEFVREKRFGNWLKEARDWAISRNRYWGTPIPLWVSEDFEEVVC
IGSVAELEELSGTKISDLHRESIDHLTIPSRCGKGPLRRVSEVFDCWFESGSMPYAQVHY
PFESKREFEDAFPADFIAEGIDQTRGWFYTLLVLATALFGQPPFKNVIVNGLILASDGQK
MSKRKKNYPDPVSIINKYGADALRLYLINSPVVRAENLRFKEEGVRDVLKDVLLPWYNAY
RFFIQNVFRLHKEEEVEFLYNEHTVRESPNITDRWILSFMQSLIAFFETEMAAYRLYTVV
PRLVKFVDILTNWYVRMNRRRLKGENGMEDCVMALETLFSVLLSLCRLMAPYTPFLTELM
YQNLKLLIDPASIRDKDTLSIHYLMLPHVREELIDKKTENAVSRMQSVIELGRVIRDRKT
IPIKYPLKEIVVIHQDPEALEDIKSLEKYIIEELNVRKVTLSTDKNKYGIRLRAEPDHMV
LGKRLKGAFKAVMVAVKQLSNEELEQFQKSGSIVVEGHELHEEDIRLMYTFDQATGGTAQ
FEAHSDAQALVLLDVTPDQSMVDEGMAREVINRIQKLRKKCNLVPTDEITVYYNAKSEGR
YLSNVIESHTDFIYATIKAPLKPYPVPTSDNILIQEQTQLKGYELEITITRGSCVPGPAC
AYVNLNICANGTEQGGVLLLENPKGDNQLNLEKLKSVITSIFGVKSTGLSVFNGGTELQN
QTDLLSLSGRTLCVTAGASLAPASSPSTLLCQYINLQLVNAEPQECLTGTVGTLLLENPL
GQNGLTHQGLVYEAAKVFGLRSRRLKLFLNETQTQEITEDIPMKTLNMKTVYVSVLPTTA
DG
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atggttcaacaagttccggaaaacatcagctttcctgctgaagaagaaaaaatcttacag
ttctggtccaaatacaactgtttccaggaatgcctaaagcagtcaaagctcaggccaaag
tttaccttctatgatgggcctcccttcgctactggactgcctcactacggacacatactt
gcggggacaattaaagatatagttacaagatacgctcaccagagcgggtttcacgtcgac
agaagattcgggtgggattgtcatggcttacctgtggagtacgagattgacaagaccctg
gggatcaaagggccagaggacgtggccaagatggggatcgcagagtacaacaagcagtgc
cgagctattgtgatgaggtactccgccgagtggaagtctactgttaccaggcttggccga
tggatcgactttgacaatgactacaaaaccctgtacccacaattcatggaatcagtctgg
tgggtcttcaagcagctgtatgacaaaggcctcgtgtacagaggcgtgaaagtcatgccc
ttctccaccgcgtgtggaactccactctccaacttcgagtcgaaccagaattacaaggac
gttcaggacccttcagtatttgtaacgttccctttggaggaagatgaaaacacatcctta
gttgcttggacaaccactccgtggaccctacccagtaaccttgcgctatgtgtcaatcca
gaaatacagtatgtgaagatcaaagacgtttccagggggaagttgttcattttgatggaa
gccagattgtcggccctctataaacaagagagcgactatgagatccttgaaaggtttcct
ggtgcctctctcaaaggcaagaaatacaagccgttgtttgactactttattaagtgtaag
gagaacggtgccttcaccgtgcttgttgaccactatgtgaaggatgaagaaggcacaggt
gtcgttcaccaggctccttactttggcgctgacgatcatcgagtctgtatggacttcaac
atcattcagaaagactcagcccctgtttgtcctgtggatgcttcaggctgcttcacagag
gaagtgacacattttgtcgggcagtatgtgaaggatgctgacaaaaatatcatcaggatg
ttgaaggagcagggccgactgctcgtggcaagcaccttcactcacagctaccctttctgc
tggaggtcggacactcccctcatttacaagtccgtgcccagctggttcgtgcgggtggag
cacatggtggaccagctactgaagaacaatgatctgtgttactgggtcccagagtttgta
cgagaaaaacggtttggaaattggctgaaggaggcacgtgactgggcaatttcccgaaac
agatactggggcacccccatcccactgtgggtcagtgaagactttgaggaggtagtgtgc
atcgggtcagtggcagaacttgaagaattgtcaggaacaaaaatctcagatctccacaga
gagagcatcgaccacctgaccataccatcccgctgcgggaaaggaccgttgcggcgtgtc
tctgaggtgtttgactgttggttcgagagtggaagtatgccttacgcccaggttcattac
ccctttgagagcaagcgagagttcgaggatgcctttcccgcagacttcattgctgaaggc
atcgatcaaaccagaggatggttttacaccctgctagtgctagccacagccctctttgga
caaccacctttcaagaacgtgattgtgaacggcctcatcttggcaagtgatggccaaaaa
atgagcaaacggaaaaagaactacccagatccggtttccatcatcaataagtacggtgcc
gacgccctcaggttatatctgatcaattcccctgtggtgagagcagaaaacctgcgcttc
aaggaggaaggcgtacgggatgtcctcaaagacgtgctgctcccatggtacaacgcatac
cgcttcttcatccagaacgtctttaggctgcacaaggaagaagaagtagagtttctgtac
aacgagcacacggtccgagaaagccccaacatcaccgaccggtggattctgtccttcatg
cagtcgctcattgcgttctttgagacggaaatggcagcttacaggctgtacactgtggtg
cctcgcctggtcaagttcgtagatattctgaccaactggtacgtccgaatgaacaggaga
agattaaagggggagaatggcatggaagactgtgttatggctctggagactctgttcagt
gtcctgctttctctgtgcagactgatggccccttacacaccctttcttactgaactgatg
taccagaacctgaagctgctgattgaccctgcatctatccgggacaaggacaccctcagc
atccactacctcatgctgcctcatgttcgagaggagctgattgacaagaaaactgagaac
gccgtgtctagaatgcagtccgtgattgagcttgggagagtgattcgagaccggaaaact
attccaataaagtatcccttgaaggaaattgtcgtcatccaccaagacccagaagctctt
gaggatatcaagtccttggagaagtatatcattgaggaactaaatgttcgaaaagttaca
ctgtctactgataaaaacaagtatggcattcgactgagggctgagccagatcacatggtc
cttgggaaacgtctgaagggagcctttaaagcagtgatggtggccgtaaagcagctgagc
aatgaggagctggagcagtttcagaagagtgggagcatcgtcgtggaaggccatgaatta
cacgaagaagatattcgtctcatgtacacctttgaccaggccacaggaggcactgcacag
tttgaagcacactctgatgctcaggctttagttctcttagatgtcacacctgaccagtca
atggtggacgaaggcatggctcgggaagtcatcaatcgcatccagaagcttcgcaagaag
tgcaacctggttccgacggatgaaataacagtttactataatgccaaatctgaaggaaga
tacttgagtaatgtcatcgaaagccacactgacttcatatatgccactatcaaagctccc
ttgaagccctatccagttcctacatcagataatatccttattcaagagcaaacacagtta
aaggggtacgagctggaaatcacgatcaccagaggatcctgtgtgcctgggcccgcttgt
gcttatgtgaaccttaacatttgtgcaaatggcactgagcaaggtggagtgttactcctg
gagaatccgaagggtgataatcagttgaaccttgagaagctgaagagcgtcattaccagc
atattcggtgttaaaagcacagggctgtcagtcttcaacggtggaacagaattacagaac
cagactgacttgctgagcctcagtggaaggacgctgtgtgtgactgcaggagcatccctg
gctccagccagcagccccagcacccttctctgtcagtacatcaacctgcagctcgtgaac
gcagagccacaagagtgtttaacaggaactgtgggcaccctcctgcttgaaaacccactt
ggacagaacgggctcacccaccaagggcttgtgtacgaagcagccaaggtgtttggactg
cgcagccggaggctaaagctgttcctgaatgagactcagacacaagaaattacagaagat
atcccaatgaagactttgaatatgaagactgtatatgtttctgtcttgccaacgactgca
gatggctaa
DBGET
integrated database retrieval system
