Rattus norvegicus (rat): 310137
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Entry
310137 CDS
T01003
Symbol
Cplane1
Name
(RefSeq) ciliogenesis and planar polarity effector complex subunit 1
KO
K22859
protein JBTS17
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rno03037
]
310137 (Cplane1)
Cilium and associated proteins [BR:
rno03037
]
Primary cilia and associated proteins
Ciliogenesis and planar polarity effectors (CPLANE) complex
310137 (Cplane1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Joubert
Motif
Other DBs
NCBI-GeneID:
310137
NCBI-ProteinID:
NP_001414115
RGD:
1310081
Ensembl:
ENSRNOG00000042118
LinkDB
All DBs
Position
2:58996119..59096817
Genome browser
AA seq
3224 aa
AA seq
DB search
MEMRLEVLTSTSIKQKKPWPRVSWLGQENEAVFLLDEKFINEINLLSGRTKKKIPSLQPL
LKDVVFLATSTNDVWLSGVLTTGELFLWNRDQDCVKKIQVTERPKEAIKATVASSSRLSL
YVAENGKRILLITSSGCILLWEYMELKNILSSKSLSLVGQWSQIVPEEAILLPSTKDKEA
VVDAVFVKNELFGDRCLCSFTFYSGECLKLTFLAIQWYENIFTSIRSLPFRVHWAQQECR
LCNLIPKCASVKSRGALISAFSRDGLALAVTLNQKDPTATQVLFINTLNFVTLCGGLKGC
SNKNPVVPATLTRSYWVGDISWTHDSLFLACVLKRGSLVLLTCLGELLTLVTFGCSIEFG
PAEFIPLHPLITYRPQRLPFQDSNNAVDSAASESDPLRQRFSIKAHSRLPYLLISDGYMV
TTLRFLDNQSPTMLVRALLLDSTQRLEKAYQSMMLSKPKEKGLNLRSLDSLRSSLLKRHG
KESSVQCTVPRFLQAEETVKLSETTDFQDFEGEETNEVEQFLNSSFSFCDQRKDILFNTA
KEGRLEFASMFDTIHAKDDSKETDRTIAELHCIQKKLLAAWTIGVSKNVAEKKLMLNYTV
LCITHFFYILQFIKCPLPKFDLFLNKSLKHNTWVLCIFQLFHQCLSTHYWDMRYRQNVGH
LLKLTANTVKLLLTQQRKHGLFSEKLLACLSLLRTVTDCLNGTCSLQPEAAPAAADGSRP
AELDSLMVPIFQSSKENWSWDSSLKIYPQVTNLVQKPGHRLIALWRLLYKKTLWYQAQLS
RRIPDGDRQLTENITHEVSLVKTLLCHVQANLQVAGDSLSQALELTALSGEECFLLASYE
KSVCLWKKALQETQEKGGRRMRFLQLRYYLSLLYCHLYCYNLNDAQGLCDHLVREILSYS
QLPVQERRDYSDPEVAVTRNVHPEAAVRVVQCMARFMAAYFTNEPLFILPPHSVNVLPPL
HVKTEHSVRLIPLQHSKVASIVRDQNLSNVWTVEYTLELLFIGGLIPEAVWMAHKLGDWK
TSVSIGVAFQAFCKRDCNSMWSKKKGMDLPLNMIPAQIFQEKLQCFLGQPVSLAAKNEKG
SKYKQFTDPIEEEDANLLFGSVQEVLKASAMADADIVSETLQLLMDSAKDFSKKLWGLVP
VDLYLPAPPLYCPQPALLSEEHGDNLLLKAEKDNRQKLSGILQRVLLLFRASRCSFPVAQ
WYILQLRWARKVMQKIRVKGSLPSLSSFPESLLNYCKGGIAFFRPGAAGDHKLDEVSIKA
LGCFRELCALCWMLHIRDKLSYTCRQYQKARENTKIEKDLEVEFDSCVVEHCFHALEWAC
RMLPFSRFFNMEELIQDIILSLIGELPPIRKVAEIFVKAFPNPEAIRVPLREKYHSLQQK
LKHGVVKGPQTEELMSVVMRSAHKVRVKALKRVQRNIGAFEMNIWEPDEEEKPAAAPATA
DTFSLGTSLSRSTLTLELGSSLLHSDADTFSETLSFEEKTWIHLYQRHAPSHMDLALVGK
PSDKKKISNQKENPQRKEDHETSGKEALPVIGVWEFERDDDEYMNFLELFLSYVLERDLC
SRDPGIPFLTSFSEHLREHELNSLLFDVHTTLKRRQSKASSDSVYRAGSCFAVTPESQES
ENLFSLNNAGARNLESQALSALEVGSQSGSTAENPLPEVMNHERKVGLFGLKQKPIYRAP
DDKREKPTVQRSSGHPFWIPKFFKTGRHSFRVLQCSAGHPREDLPLVLQNLFGDAGRLVE
WMIRWSDRRLLCDSEVTRSSCKYSPVIRVKTSTAAILTSLWLLEQPYLAAYSATNGIIKV
LENHCTKSQVTAERESNTDGNADSPIPVAAQTGAEERSDQDECCQGIWNRMPAEAENREV
KSTDDEILPVTHRTEKECVDADERHSEGESFTQDEMDVHILDPEEGSVGSPRVPDAVTRW
PVSQLSEHSTEEAQCSRKEPLETSVDTKLTEQKGAQISELKDKPSTVPPLMSNGAQVTSQ
TSQKTQGNDHRVQLPDSSDSVRQMLQDEMFKLVQLQQINFLSLMQIVGPSVANLPDTQRL
VQQAQSVHFGESQVANPTRSDCIEVNSGQKLLAKPQSMGECTRHPGKSSPPGHERISQPD
QDSNGETQDIAHESTPLGRSDGQPKPRWRTGASRSCAPACLPHVPGGEGGLQLLFTAAAV
QKTPQLIPPARAATAGSAFPLLHFQPKHEFKPLPLPVGRIPGAPFRPQAQPKEAWGLSDS
CQSPVSQRMVHTMPPSPSGSSQYYNAQAMRKAEAVLPGIPKHENLDQCTGQESVTPQQDS
SVFIKPGSVFDVTPRPPETALQNSFGLPLLHLQFKPSYVFSMPSRAALGSFPSVPGTEGT
KHPQLSLLHPCLPPENTYKKPQLIPLENLLAFKRSQQKLAHNVFEQGDSAHLQFLKVNME
APKITQGKKRQSRRAERELQERRAQKPRRKPSVSFRPDDSLISNESEVPMEPKEQLGHHD
SQPLDKFDIPFEMLEHDVNTSAGLHFMASVQKKAVGRHDASTNTDPAQDKEGTSQEVDSE
SNKTQQVVSTNSGHEPLNVPQLLIPDIYLNARLPTGISEKPLSPSPPHMARHTYIDVIDI
EADDLLGLPASEEPSDDVAKQQSHPPEAPSSAELHCMAASVVSTAPPHPSQSQESAGSTL
GLISEPAKMTQSCQDGESWRKSVMEAKEPEILSVMPSDRQQGGEQNFQFKEQSTKLDSAE
QSLLWTLLQDASPACPTPSPAACPPPSPVTCVPPSPAACVPSSPAACVPSNPAVCPTPSP
SAQKLEHLTAKLQKMDEQLLTVQTIAENIEQDFPAPEVLNLHWEKAGLVDHVGLSSRPEI
EKLLASKAISISEVSFQTPEDVEDQNNTEEASEAESSVTEDHSSQKAYTCPSAGSAACSS
VGWNITSPGVNNSKELFKSVSEDQLQVTGLTDIADIIDDLITKRGVSSHELGLTEYQARN
ISRIQHPSGRRPQRTDEERREIKVWMKRKRKERMAEYLDQLAEKRGREHDPFCSRSSPFY
MTSRQIRQRQKMKHEKDRLQLSNHYSQRISQAYSLMNELLSDSVQITKPADKPLGRRRQQ
CSSPKRENAQGQNLSSNRPAGGRHISGSRHLRKGEPLGRPHGSSQLRGSNPPYRSQQPMR
SHGAVGVVPLVQQACIEDEREDMVVSPWTLPSEIHKILHDRSGSLLQDMSAADEEEPEHS
LAGGMDSVSESTGSILSKLDWKAIEDMVASVEEKNLSVHWALDQ
NT seq
9675 nt
NT seq
+upstream
nt +downstream
nt
atggagatgagattagaagttttgacatcaacgagtatcaaacagaaaaaaccctggccc
agagtgtcctggttgggtcaagaaaatgaagctgtttttcttctggatgagaaattcata
aatgagattaatttgctgtcaggaagaacaaagaagaagattcctagtctgcagcctttg
ttgaaggatgttgttttcctggcaacatccactaacgatgtgtggctgtccggggtcctc
actacaggagagctgttcctctggaacagagatcaagactgtgtgaaaaagatacaagtg
actgaaaggcctaaagaagctataaaagctacagtagcaagctcttcaagactatcctta
tatgtagctgaaaatgggaaaagaattctgcttattacatcttctggctgcatacttctg
tgggaatacatggaattgaagaatatcttatcttctaaaagcctttctttggtgggtcag
tggtctcagattgtgcctgaagaagcaattttattgccttccactaaagataaagaagct
gtagtggatgctgtttttgtaaaaaatgagttatttggtgaccgctgcctgtgttcattt
actttttattctggagaatgcttgaagctaacatttctggccattcagtggtatgagaat
atatttacatctataaggtcactgcctttccgtgttcactgggcacaacaggaatgccgt
ctgtgcaatctgattcctaagtgtgcatcagtaaagtcaagaggagctctgatctctgcc
ttctcaagagatggccttgctctagcagtaactcttaatcagaaagacccaacggcaact
caggtattatttataaacacattgaatttcgtgactctctgtggtggccttaaaggatgt
agtaataagaatcccgtggtcccagctacacttaccaggtcatattgggttggtgacatc
agctggacgcatgacagtctttttctggcttgtgtattaaagcgtggctccctggtttta
ttgacctgcctgggtgaattgctaacattagttacatttggttgttctatagagtttggg
ccagctgaatttattcctcttcatccactaataacatatagaccacagcggcttccattt
caagattcaaataatgctgttgattcggcagcctctgagagtgaccctctgagacagagg
ttttctataaaagcgcactcacgactaccctaccttctcatctctgatggctacatggtc
acaacccttcggtttcttgataaccagtctccaacaatgctcgtgagggccttgcttctt
gattcaacccagaggcttgagaaagcctaccagagcatgatgctgtctaagcccaaggag
aaagggctgaatttgcgatctctggattccttgaggtctagcctgttaaagcgtcatgga
aaggaaagttcagttcaatgcactgtccccagatttttgcaggcagaagaaacagtgaag
ttaagtgaaaccacagattttcaggattttgaaggagaagaaactaatgaagttgaacag
tttctaaacagttcattttctttttgtgaccaaagaaaagatatactgtttaatactgcc
aaggaaggaagattggagtttgcatctatgtttgatacaattcatgcaaaggatgattcc
aaggagacagacagaaccattgcagaactgcattgtatccagaaaaaactacttgcagct
tggactataggagtttcaaaaaatgtagcagaaaaaaagttaatgttaaattacacagta
ctttgcatcactcactttttctatattcttcagtttataaaatgtcctttgccaaagttt
gacctgtttttaaataagagtctgaagcataacacctgggtactctgtatctttcaactt
tttcatcagtgtttatcaacccactattgggatatgagatacagacaaaatgtgggccat
ttgctgaagctcaccgcaaatactgtaaagcttctcttgactcagcaacgaaaacatgga
ttgttctcagaaaagcttctagcttgcctttctttactccgaactgtgactgactgttta
aatggcacgtgcagtctgcagcctgaggctgctcctgcagcagctgatggaagtcgacca
gcagagctagactcgttaatggtacccatttttcaatcttccaaggaaaattggtcttgg
gactcatctttaaagatttatcctcaagtgacaaatctagttcagaagccaggtcacaga
ttgattgctctttggagactattatacaagaaaactttatggtatcaagcacaattaagc
cgaagaattcctgatggtgacagacaattaactgaaaatatcacacatgaagtatcttta
gtcaagactctgttatgtcatgtccaggctaacctgcaggtggctggggatagcttgagt
caagccttagaacttacagctctcagtggtgaagagtgttttctgctagcatcatatgaa
aagtcagtttgcctgtggaagaaggctctacaagaaacccaagagaaaggaggaagaagg
atgcgctttcttcagttacgctactatctctctctcttgtactgtcacctctactgttac
aatttaaacgatgcccaaggattatgtgatcacctagtaagagagatactcagctattcc
caattacctgtacaagaaaggagagattactcagatcctgaggttgcggtgactagaaat
gtacatcctgaggcagcagtcagagttgtccagtgtatggcccgtttcatggctgcctac
ttcaccaatgagccactcttcatcctgccacctcacagtgtgaatgtccttcctccgctt
catgttaagacagagcattccgtgcgacttattcctctacaacactctaaggtggccagt
attgttcgagatcagaatctctcaaatgtgtggacagttgaatatacccttgaattatta
tttattggtggcctgattccagaggctgtgtggatggcacataaacttggagactggaag
acatctgtttccattggtgtggccttccaagcgttctgtaaacgtgattgcaattctatg
tggtccaagaaaaagggcatggacctacctttaaatatgataccagcccagattttccag
gaaaaactgcagtgttttttaggtcagccagtctctttggcagcaaaaaatgaaaagggc
tcaaaatataagcaatttacagatcccattgaagaagaagatgccaatctgctgtttggg
tctgtgcaagaggtgctgaaagcttcagccatggctgatgctgatattgtttcagaaaca
ctacagctgttgatggactccgctaaggacttcagtaaaaagctgtggggcttagtgccc
gtcgacttgtatcttccagcgcctccgttgtattgcccccagcctgcccttcttagtgag
gaacatggtgacaatcttcttttaaaagctgaaaaagataaccgccagaagctgtctggg
atcctgcagcgcgttctcctgcttttccgggcatctcggtgttcttttcctgtcgcacag
tggtacatcttacagctgaggtgggcaagaaaggtcatgcagaagattcgagtgaaaggg
tccctcccttctcttagttctttccctgaatccttacttaattactgtaaaggagggata
gcattctttagacctggagcagccggagaccataagcttgatgaagtttccatcaaagcc
ctaggttgcttcagagaactttgtgctttgtgctggatgttgcatatccgggataaatta
tcatacacttgcaggcagtatcagaaagcaagagaaaatacgaagatagaaaaggacctt
gaggtggagtttgattcttgtgtggttgagcactgttttcatgcactggaatgggcctgt
aggatgctaccattctctcggttttttaatatggaagaacttattcaggatataattttg
agccttattggagaactgccaccaatcagaaaggtagcagaaatttttgtgaaagcattt
cccaatcctgaggccataagggttcctttaagagaaaaataccactcacttcaacagaaa
ctcaaacatggtgttgtgaaaggtccccagactgaggaactgatgtctgtggtcatgagg
tctgcccataaagtgagggtgaaagccctaaaacgtgtgcagaggaacataggcgctttt
gagatgaatatatgggagccggatgaagaagaaaaaccagctgctgctcctgccaccgct
gacacgttttccctgggaaccagtttgagcagaagtacactcaccttagaactgggcagt
tctctgctacacagtgatgcagataccttctctgaaaccttgtcttttgaagagaaaact
tggatacacttgtatcaaaggcatgccccaagtcatatggatttagcattggttggtaag
cccagtgataaaaagaaaataagtaatcagaaagagaacccccaaaggaaagaagatcat
gaaacttcagggaaagaagcacttcctgtaattggtgtttgggaatttgagcgtgacgat
gatgaatatatgaacttccttgagctcttcttgagctatgttcttgaaagagacctttgt
tcccgtgatcctggcattccatttttgacaagcttttctgagcatcttagagaacacgaa
cttaattctctactttttgatgtacatacaacattaaaacgacgccagagcaaagccagc
agtgacagtgtgtatagagctggttcctgctttgctgtcactcctgagtcacaggaatct
gaaaacctgttttctctaaacaatgcaggagccagaaatttagaaagccaggccctttca
gctttagaagtaggtagccagtcagggagcactgcagagaaccctctacctgaagtcatg
aaccatgaaagaaaggtgggattgtttggtttaaaacaaaagccaatttatagagctcca
gatgacaaacgggagaaacccacagttcagaggtcatcaggccaccccttttggattccc
aagttctttaaaactggaagacacagtttccgagtgcttcagtgcagtgctggccaccct
cgggaggaccttcctctggtacttcagaacttgtttggtgatgcagggagactggtagag
tggatgatccggtggtcagatcggagactcctctgtgattctgaggtcactcggtcgtcc
tgtaaatacagtccagtaattcgtgtgaagacctctacagctgccattcttacctcattg
tggcttctggagcaaccctacttggctgcatattcggcaaccaatggcattattaaggtt
ctagagaatcattgcaccaagtctcaagtgacagctgagagggagagcaacactgatgga
aatgctgactctccaattccagtagcagctcagactggagctgaggagaggagtgaccag
gatgaatgctgtcaaggcatctggaacagaatgccagctgaagcagaaaaccgtgaagtg
aaatcaactgacgatgagattcttcctgtaactcataggactgagaaagaatgtgtagac
gctgacgagcgtcattcagaaggagagtcatttacacaggatgaaatggatgtgcacatc
ttagaccccgaagaaggatctgttgggagccccagagtccctgatgctgtcacccgctgg
ccagtgtcccagctctcagagcattccacagaagaggctcagtgttccaggaaagaacca
ttggagaccagcgtggatacaaaattgacagaacagaaaggtgcacagatttctgaactt
aaagataaaccatccacagttccacccctcatgtcaaacggagcccaggttacttcacaa
acatctcagaagactcagggaaatgaccacagggttcagttaccagattcttctgattct
gttaggcagatgctccaagatgaaatgtttaaattagttcagctgcagcagatcaatttt
ctgagcctgatgcaaatagtaggaccatctgttgctaatctcccagacacgcagcgactt
gttcagcaggctcagtctgtgcatttcggggaaagccaagtagcaaaccccacaaggagt
gattgtattgaagtcaacagcggacagaaacttcttgctaaaccacaatccatgggagag
tgcactaggcatcctggcaagagcagcccaccaggccatgaaagaattagccaacctgat
caagatagtaatggagagacacaggatattgcacatgagagtactcccttgggtcgatca
gatggccagcctaagccgagatggcgaactggagcatctcgaagctgcgctcctgcttgc
cttccccacgttcctggtggagagggtggcctccagctcttgttcacagctgctgctgtg
cagaagacgcctcagctgattccacccgccagagccgccactgctgggagtgctttccct
ttgcttcattttcagcccaagcatgaattcaagcccctgcccttacctgtaggaagaatt
ccaggagctcctttcaggccccaggcccaaccaaaagaggcttggggcctgtctgactct
tgtcaatctcccgtgtctcagagaatggtgcataccatgccaccatctccttcaggttca
agccagtactataatgctcaggccatgagaaaagccgaggctgtgctcccaggcatcccc
aagcatgagaacttggatcagtgcactgggcaagagtccgtgacaccgcagcaggattcc
tcagtgtttataaagccaggaagtgtattcgatgttacaccaaggccccctgagacggct
cttcagaattcttttggacttcctttattacaccttcagtttaagccttcttatgtattc
tccatgccatcgagagcggcattaggtagctttccctcagtacctggcacagaaggaaca
aaacatcctcaactatcattacttcatccatgcttgccgccagagaatacgtataagaag
ccccagcttatcccacttgaaaacctcctggcatttaaaagaagccaacaaaaactagca
cacaatgtatttgaacaaggcgattctgcccatcttcagtttctaaaggtcaatatggaa
gcacctaaaataacacaaggaaagaagaggcaaagcagacgagctgaaagggagctgcaa
gaaagaagggctcagaagcccagaagaaagccaagtgttagtttccgaccagatgattcc
ctcattagtaatgagtcagaagtccccatggaacccaaggaacaactaggacatcatgat
tctcagcctttggataaatttgacattccttttgaaatgttagaacacgatgttaatact
tcagctggactgcatttcatggcctctgtacaaaagaaagctgtgggacgtcatgatgct
agtacaaacacagacccagcacaagataaagaaggcacttcccaagaagttgattctgaa
agtaataaaactcagcaagtcgtttctacaaattcaggccatgaacctttgaatgttcca
cagcttttaattccagacatatatctaaatgccagacttcccaccggaatatcagagaaa
cctttgtctccatccccacctcatatggctagacacacatatatagatgtgattgacatt
gaagctgatgacctgttgggattgcctgccagtgaagagccttcagatgatgttgccaag
cagcaaagccatcctccagaagccccatcgtctgcagagttacactgcatggcagcttca
gttgtcagtactgctccccctcatccttctcagagtcaagaatctgcaggttctactctg
ggtttaatttctgaacctgcaaaaatgactcaatcctgtcaggatggggaaagctggaga
aaaagtgttatggaagcaaaggagccggagattctctccgtgatgccatccgaccggcaa
cagggtggagaacaaaacttccagttcaaggaacagagcacaaaattggattctgcggaa
cagtccctgctttggaccctgctacaggatgcctctcctgcgtgtcccactccaagccct
gctgcgtgtccccctccaagccctgttacgtgtgttcccccaagccctgctgcatgtgtc
ccttcaagccctgctgcgtgtgtcccttcaaaccctgctgtgtgtcccacaccaagtccc
tctgctcagaagcttgaacatcttactgccaagcttcagaagatggatgagcagctgtta
acagtgcagaccattgcagaaaatatagagcaagacttccctgcaccagaagtgctgaat
ctacactgggaaaaggctggactggtggatcacgttggattatcttctcgccctgaaatt
gaaaagctactagcttcaaaagccatcagcatttctgaagtgtcttttcagactccagag
gatgtggaagatcaaaacaacacagaggaggcctcagaggcagagtcttcagtaacagaa
gatcattccagccagaaagcctacacatgcccttctgcagggtctgctgcctgctcctct
gtgggttggaacattacttctcctggtgtgaataacagcaaggaattattcaaaagtgtt
tcagaagatcaactccaggtgactggcttgacagatattgctgacatcattgatgacctc
ataactaagaggggagtgtccagccatgagcttggcttaacagagtatcaagctagaaat
atatccaggattcagcatccttctggtcgacgcccccagagaactgacgaggagagaaga
gagattaaagtctggatgaaaagaaagcggaaggagcggatggccgagtacttagatcag
ctggcagagaagagggggcgtgagcacgaccctttctgctccagaagcagcccattttat
atgacttcaaggcagatcaggcaaagacagaagatgaagcatgagaaagataggttgcag
ctgtctaaccactatagtcagcggatctcacaagcatacagtctgatgaatgaactgctg
tctgactcagtacagataaccaaacctgcagataaacccttaggtcgcagacggcaacag
tgctcctctccaaagagagagaatgcacaggggcagaacttatcttcgaatagacctgca
ggaggcagacatatttccggatcaaggcatctccgtaagggggaacccttggggcggccc
cacggctcatctcagctacgaggttctaatcctccatatcggagccagcagcctatgaga
agccatggggctgttggggtggttcctctggttcagcaggcatgcatagaggatgagaga
gaagacatggtggtgagtccctggactctgccctccgaaatccacaagattcttcatgac
aggtccgggtccctcctacaggacatgtcagcagctgacgaggaagagcctgagcactct
ttggcgggtggcatggacagcgtgtctgagagcacgggcagcatcctcagcaagcttgac
tggaaagccatcgaagacatggtggccagcgtggaggaaaaaaacctgtctgtccactgg
gccttggaccaatag
DBGET
integrated database retrieval system
